Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  17205969 8.A F Gene expression analysis (transcription) : Quantitative RT-PCR RAP-DB Id for OsABA8ox1 (LOC_Os02g47470-Os02g0703600). Gene copy number per 100ng of RNA was measured. Seedlings were treated in the vessel filled with 300p.p.m. 1-MCP gas in the light for 6h, and then they were completely submerged for indicated times in the dark.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] # # 1205.8221
grp_1_1_1
 
  1 2 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] MCE:1000010 1h # 128565.8  
  1 3 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] MCE:1000010 2h # 35964.906  
  1 4 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] MCE:1000010 4h # 14772.127  
 
LOC_Os02g47470-cytochrome P450, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
WT-Wild Type
d-Days
h-Hours
MCP:1000518-seedling development stage
PO:0009006-shoot system
MCE:1000010-submergence stress
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] # # 1205.8221
grp_2_1_1
 
  2 2 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] MCE:1000309 300ppm 6h MCE:1000010 1h # 73249.655  
  2 3 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] MCE:1000309 300ppm 6h MCE:1000010 2h # 14634.441  
  2 4 LOC_Os02g47470 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[8d] MCE:1000309 300ppm 6h MCE:1000010 4h # 5660.1566  
 
LOC_Os02g47470-cytochrome P450, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
WT-Wild Type
d-Days
ppm-parts per million
h-Hours
MCP:1000518-seedling development stage
PO:0009006-shoot system
MCE:1000010-submergence stress
MCE:1000309-1-methylcyclopropene
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  17205969 8.A F Gene expression analysis (transcription) : Quantitative RT-PCR RAP-DB Id for OsABA8ox1 (LOC_Os02g47470-Os02g0703600).  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os02g47470 GO:0030912 # # # # #            
 
LOC_Os02g47470-cytochrome P450, putative, expressed
GO:0030912-response to deep water
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India