Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  17693452 1.A F Gene expression analysis (transcription) : Semi-quantitative RT-PCR OSMST8-LOC_Os01g38670. Determination of anther developmental stages was carried out using the AD method (AD = the distance in cm between the nodes of the flag leaf and the penultimate leaf). Here, Young Microspore stage refers to AD 0 to +2.5 cm & Early Bicellular stage refers to AD +6 to +8 cm.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os01g38670 # # 39947 CU:022 # WT # PO:0009066[#] PO:0001012[#] # # 2
grp_1_1_1
grp_1_1_2
grp_1_1_3
 
  1 2 LOC_Os01g38670 # # 39947 CU:022 # WT # PO:0009066[#] PO:0001012[#] EO:0007332 3d 12°C # 1  
  1 3 LOC_Os01g38670 # # 39947 CU:022 # WT # PO:0009066[#] PO:0001059[#] # # 5
grp_1_3_1
grp_1_3_2
 
  1 4 LOC_Os01g38670 # # 39947 CU:022 # WT # PO:0009066[#] PO:0001059[#] EO:0007332 3d 12°C # 4  
  1 5 LOC_Os01g38670 # # 39947 CU:242 # WT # PO:0009066[#] PO:0001012[#] # # 3
grp_1_5_1
grp_1_5_2
 
  1 6 LOC_Os01g38670 # # 39947 CU:242 # WT # PO:0009066[#] PO:0001012[#] EO:0007332 3d 12°C # 3  
  1 7 LOC_Os01g38670 # # 39947 CU:242 # WT # PO:0009066[#] PO:0001059[#] # # 4
grp_1_7_1
 
  1 8 LOC_Os01g38670 # # 39947 CU:242 # WT # PO:0009066[#] PO:0001059[#] EO:0007332 3d 12°C # 4  
 
LOC_Os01g38670-
39947-Oryza sativa japonica group
CU:022-cv. Doongara
CU:242-R31
WT-Wild Type
d-Days
PO:0001012-G early unicellular microspore stage
PO:0001059-J bicellular pollen stage
PO:0009066-anther
EO:0007332-cold air temperature regimen
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  17693452 1.A F Gene expression analysis (transcription) : Semi-quantitative RT-PCR OSMST8-LOC_Os01g38670.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os01g38670 GO:0009409 # # # # #            
 
LOC_Os01g38670-
GO:0009409-response to cold
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India