| Regulation details |
|
PubMed Id |
Figure
|
Type |
Experimental method |
Comment |
|
| |
19208695 |
4.B |
F |
Gene expression analysis (transcription) : Quantitative RT-PCR |
GenBank accession for OsNCED1-AY838897(LOC_Os02g47510);OsNCED2-AY838898( LOC_Os12g24800);OsNCED3-AY838899(LOC_Os03g44380);OsNCED4-AY838900(LOC_Os07g05940). |
|
| |
|
|
|
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
1 |
1 |
LOC_Os02g47510 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[#] |
# |
# |
 0.19675 grp_1_1_1 |
|
| |
1 |
2 |
LOC_Os02g47510 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[4h] |
# 4h |
# |
0.25509 |
|
| |
1 |
3 |
LOC_Os02g47510 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[6h] |
# 6h |
# |
0.40606 |
|
| |
1 |
4 |
LOC_Os02g47510 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[12h] |
# 12h |
# |
0.10694 |
|
| |
1 |
5 |
LOC_Os02g47510 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[24h] |
# 24h |
# |
0.1097 |
|
| |
1 |
6 |
LOC_Os02g47510 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[48h] |
# 48h |
# |
0.19628 |
|
|
| |
LOC_Os02g47510-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
|
WT-Wild Type
h-Hours
h-Hours
|
PO:0007022-imbibition
PO:0009010-seed
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
2 |
1 |
LOC_Os12g24800 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[#] |
# |
# |
0.4761 grp_2_1_1 |
|
| |
2 |
2 |
LOC_Os12g24800 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[4h] |
# 4h |
# |
0.55771 |
|
| |
2 |
3 |
LOC_Os12g24800 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[6h] |
# 6h |
# |
1.32144 |
|
| |
2 |
4 |
LOC_Os12g24800 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[12h] |
# 12h |
# |
0.14358 |
|
| |
2 |
5 |
LOC_Os12g24800 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[24h] |
# 24h |
# |
0.10002 |
|
| |
2 |
6 |
LOC_Os12g24800 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[48h] |
# 48h |
# |
0.1173 |
|
|
| |
LOC_Os12g24800-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
|
WT-Wild Type
h-Hours
h-Hours
|
PO:0007022-imbibition
PO:0009010-seed
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
3 |
1 |
LOC_Os03g44380 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[#] |
# |
# |
0.10405 grp_3_1_1 |
|
| |
3 |
2 |
LOC_Os03g44380 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[4h] |
# 4h |
# |
0.11637 |
|
| |
3 |
3 |
LOC_Os03g44380 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[6h] |
# 6h |
# |
0.19799 |
|
| |
3 |
4 |
LOC_Os03g44380 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[12h] |
# 12h |
# |
0.09538 |
|
| |
3 |
5 |
LOC_Os03g44380 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[24h] |
# 24h |
# |
0.10977 |
|
| |
3 |
6 |
LOC_Os03g44380 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[48h] |
# 48h |
# |
0.12711 |
|
|
| |
LOC_Os03g44380-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
|
WT-Wild Type
h-Hours
h-Hours
|
PO:0007022-imbibition
PO:0009010-seed
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
4 |
1 |
LOC_Os07g05940 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[#] |
# |
# |
0.10646 grp_4_1_1 |
|
| |
4 |
2 |
LOC_Os07g05940 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[4h] |
# 4h |
# |
0.11871 |
|
| |
4 |
3 |
LOC_Os07g05940 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[6h] |
# 6h |
# |
0.22352 |
|
| |
4 |
4 |
LOC_Os07g05940 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[12h] |
# 12h |
# |
0.12938 |
|
| |
4 |
5 |
LOC_Os07g05940 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[24h] |
# 24h |
# |
0.12085 |
|
| |
4 |
6 |
LOC_Os07g05940 |
# |
# |
39946 |
CU:238 |
# |
WT |
# |
PO:0009010[#] PO:0007022[48h] |
# 48h |
# |
0.12374 |
|
|
| |
LOC_Os07g05940-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
|
WT-Wild Type
h-Hours
h-Hours
|
PO:0007022-imbibition
PO:0009010-seed
|
|
| |
|
|
|
|
|
|
