Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  19208695 5.ii F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank accession for OsNCED2-AY838898( LOC_Os12g24800).Fig 5 has been split into 4 Parts.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] EO:0007198 3h # 0.28843
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000241 1% 3h # 0.11039
grp_1_2_1
 
  1 3 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000241 3% 3h # 0.05341
grp_1_3_1
 
  1 4 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000241 6% 3h # 0.12107
grp_1_4_1
 
  1 5 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] EO:0007198 6h # 0.53412
grp_1_5_1
 
  1 6 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000241 1% 6h # 0.29555  
  1 7 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000241 3% 6h # 0.29199  
  1 8 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000241 6% 6h # 1.09674  
 
LOC_Os12g24800-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
EO:0007198-water environment
MCE:1000241-D-glucose
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] EO:0007198 3h # 0.28487
grp_2_1_1
grp_2_1_2
 
  2 2 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000044 1% 3h # 0.32404
grp_2_2_1
 
  2 3 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000044 3% 3h # 0.46291
grp_2_3_1
 
  2 4 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000044 6% 3h # 0.56261
grp_2_4_1
 
  2 5 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] EO:0007198 6h # 0.527
grp_2_5_1
 
  2 6 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000044 1% 6h # 0.56617  
  2 7 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000044 3% 6h # 0.37033  
  2 8 LOC_Os12g24800 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000044 6% 6h # 0.81543  
 
LOC_Os12g24800-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
EO:0007198-water environment
MCE:1000044-mannitol
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  19208695 5.ii F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank accession for OsNCED2-AY838898( LOC_Os12g24800).  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os12g24800 GO:0009749 # # # # #            
  2 LOC_Os12g24800 GO:0010555 # # # # #            
 
LOC_Os12g24800-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
GO:0009749-response to glucose stimulus
GO:0010555-response to mannitol stimulus
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India