Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  19208695 5.iv F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank accession for OsNCED4-AY838900(LOC_Os07g05940).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] EO:0007198 3h # 0.09308
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000241 1% 3h # 0.02897
grp_1_2_1
 
  1 3 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000241 3% 3h # 0.01841
grp_1_3_1
 
  1 4 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000241 6% 3h # 0.05432
grp_1_4_1
 
  1 5 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] EO:0007198 6h # 0.12601
grp_1_5_1
 
  1 6 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000241 1% 6h # 0.11904  
  1 7 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000241 3% 6h # 0.09065  
  1 8 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000241 6% 6h # 0.10154  
 
LOC_Os07g05940-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
EO:0007198-water environment
MCE:1000241-D-glucose
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] EO:0007198 3h # 0.09489
grp_2_1_1
grp_2_1_2
 
  2 2 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000044 1% 3h # 0.03077
grp_2_2_1
 
  2 3 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000044 3% 3h # 0.0595
grp_2_3_1
 
  2 4 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[3h] MCE:1000044 6% 3h # 0.11325
grp_2_4_1
 
  2 5 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] EO:0007198 6h # 0.12425
grp_2_5_1
 
  2 6 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000044 1% 6h # 0.19585  
  2 7 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000044 3% 6h # 0.15674  
  2 8 LOC_Os07g05940 # # 39946 CU:238 # WT # PO:0009010[#] PO:0007022[6h] MCE:1000044 6% 6h # 0.12834  
 
LOC_Os07g05940-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:238-Nanjing 11
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
EO:0007198-water environment
MCE:1000044-mannitol
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India