Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  19214808 2.D F Gene expression analysis (transcription) : Northern Analysis Accession number given in paper is EF576508. 100% match with LOC_Os02g02890 starting with ATG.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os02g02890 # # 39946 CU:050 # WT # PO:0009049[#] # # 5  
  1 2 LOC_Os02g02890 # # 39946 CU:050 # WT # PO:0009049[#] EO:0007048 200mM 30m # 4  
  1 3 LOC_Os02g02890 # # 39946 CU:050 # WT # PO:0009049[#] EO:0007048 200mM 24h # 0  
  1 4 LOC_Os02g02890 # # 39946 CU:106 # WT # PO:0009049[#] # # 1  
  1 5 LOC_Os02g02890 # # 39946 CU:106 # WT # PO:0009049[#] EO:0007048 200mM 30m # 2  
  1 6 LOC_Os02g02890 # # 39946 CU:106 # WT # PO:0009049[#] EO:0007048 200mM 24h # 1  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
PO:0009049-inflorescence
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000100[#] # # 2  
  2 2 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000100[#] EO:0007048 200mM 30m # 3  
  2 3 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000100[#] EO:0007048 200mM 24h # 5  
  2 4 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000100[#] # # 1  
  2 5 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000100[#] EO:0007048 200mM 30m # 1  
  2 6 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000100[#] EO:0007048 200mM 24h # 2  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
MCP:1000100-upper leaf
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000101[#] # # 3  
  3 2 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000101[#] EO:0007048 200mM 30m # 4  
  3 3 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000101[#] EO:0007048 200mM 24h # 5  
  3 4 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000101[#] # # 1  
  3 5 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000101[#] EO:0007048 200mM 30m # 1  
  3 6 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000101[#] EO:0007048 200mM 24h # 3  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
MCP:1000101-middle leaf
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000402[#] MCP:1000404[#] # # 2  
  4 2 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000402[#] MCP:1000404[#] EO:0007048 200mM 30m # 2  
  4 3 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000402[#] MCP:1000404[#] EO:0007048 200mM 24h # 4  
  4 4 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000402[#] MCP:1000404[#] # # 1  
  4 5 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000402[#] MCP:1000404[#] EO:0007048 200mM 30m # 1  
  4 6 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000402[#] MCP:1000404[#] EO:0007048 200mM 24h # 1  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
MCP:1000402-leaf region 1 cm from shoot base
MCP:1000404-leaf region 2-3 cm above shoot base
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000084[#] # # 3  
  5 2 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000084[#] EO:0007048 200mM 30m # 4  
  5 3 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000084[#] EO:0007048 200mM 24h # 5  
  5 4 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000084[#] # # 1  
  5 5 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000084[#] EO:0007048 200mM 30m # 2  
  5 6 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000084[#] EO:0007048 200mM 24h # 1  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
MCP:1000084-upper shoot
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000104[#] # # 3  
  6 2 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000084[#] EO:0007048 200mM 30m # 5  
  6 3 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000104[#] EO:0007048 200mM 24h # 5  
  6 4 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000104[#] # # 2  
  6 5 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000104[#] EO:0007048 200mM 30m # 3  
  6 6 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000104[#] EO:0007048 200mM 24h # 2  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
MCP:1000084-upper shoot
MCP:1000104-middle stem
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000085[#] # # 4  
  7 2 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000085[#] EO:0007048 200mM 30m # 4  
  7 3 LOC_Os02g02890 # # 39946 CU:050 # WT # MCP:1000085[#] EO:0007048 200mM 24h # 4  
  7 4 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000085[#] # # 1  
  7 5 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000085[#] EO:0007048 200mM 30m # 4  
  7 6 LOC_Os02g02890 # # 39946 CU:106 # WT # MCP:1000085[#] EO:0007048 200mM 24h # 3  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
MCP:1000085-lower shoot
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  8 1 LOC_Os02g02890 # # 39946 CU:050 # WT # PO:0009005[#] # # 4  
  8 2 LOC_Os02g02890 # # 39946 CU:050 # WT # PO:0009005[#] EO:0007048 200mM 30m # 5  
  8 3 LOC_Os02g02890 # # 39946 CU:050 # WT # PO:0009005[#] EO:0007048 200mM 24h # 6  
  8 4 LOC_Os02g02890 # # 39946 CU:106 # WT # PO:0009005[#] # # 0  
  8 5 LOC_Os02g02890 # # 39946 CU:106 # WT # PO:0009005[#] EO:0007048 200mM 30m # 3  
  8 6 LOC_Os02g02890 # # 39946 CU:106 # WT # PO:0009005[#] EO:0007048 200mM 24h # 0  
 
LOC_Os02g02890-peptidyl-prolyl cis-trans isomerase, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
CU:106-cv. Pokkali, cv. Indica-Pokkali
WT-Wild Type
mM-millimolar
h-Hours
m-Minutes
PO:0009005-root
EO:0007048-sodium chloride regimen
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India