| Regulation details |
|
PubMed Id |
Figure
|
Type |
Experimental method |
Comment |
|
| |
20838584 |
12.C |
F |
Gene expression analysis (transcription) : Quantitative RT-PCR |
OsAP2-39-LOC_Os04g52090;
ELONGATED UPPERMOST INTERNODE (EUI)- Os05g0482400/LOC_Os05g40384; OsNCED1- Os03g0645900/LOC_Os03g44380. Rice leaves used for this experiment were dehydrated for 2h. |
|
| |
|
|
|
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
1 |
1 |
LOC_Os04g52090 |
# |
# |
39947 |
CU:176 |
# |
WT |
# |
PO:0025034[#] |
MCE:1000069 2h |
# |
 20.945946 |
|
| |
1 |
2 |
LOC_Os04g52090 |
# |
# |
39947 |
CU:176 |
# |
WT |
# |
PO:0025034[#] |
# |
# |
1 grp_1_2_1 |
|
|
| |
LOC_Os04g52090-AP2 domain containing protein, expressed
39947-Oryza sativa japonica group
CU:176-Kaybonnet
|
WT-Wild Type
h-Hours
|
PO:0025034-leaf
MCE:1000069-dessication/dehydration stress
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
2 |
1 |
LOC_Os05g40384 |
# |
# |
39947 |
CU:176 |
# |
WT |
# |
PO:0025034[#] |
MCE:1000069 2h |
# |
0.5912162 |
|
| |
2 |
2 |
LOC_Os05g40384 |
# |
# |
39947 |
CU:176 |
# |
WT |
# |
PO:0025034[#] |
# |
# |
1 grp_2_2_1 |
|
|
| |
LOC_Os05g40384-cytochrome P450, putative, expressed
39947-Oryza sativa japonica group
CU:176-Kaybonnet
|
WT-Wild Type
h-Hours
|
PO:0025034-leaf
MCE:1000069-dessication/dehydration stress
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
3 |
1 |
LOC_Os03g44380 |
# |
# |
39947 |
CU:176 |
# |
WT |
# |
PO:0025034[#] |
MCE:1000069 2h |
# |
20.10135 |
|
| |
3 |
2 |
LOC_Os03g44380 |
# |
# |
39947 |
CU:176 |
# |
WT |
# |
PO:0025034[#] |
# |
# |
1 grp_3_2_1 |
|
|
| |
LOC_Os03g44380-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39947-Oryza sativa japonica group
CU:176-Kaybonnet
|
WT-Wild Type
h-Hours
|
PO:0025034-leaf
MCE:1000069-dessication/dehydration stress
|
|
| |
|
|
|
|
|
|
| Functional details |
|
PubMed Id |
Figure
|
Type |
Experimental Method |
Comment |
|
| |
20838584 |
12.C |
F |
Gene expression analysis (transcription) : Quantitative RT-PCR |
OsAP2-39- LOC_Os04g52090; OsNCED1- Os03g0645900/LOC_Os03g44380. |
|
|
| |
S. No. |
Locus Id 1 |
GO Id |
Dep. loc |
Dep. type |
From |
To |
Motif |
|
|
| |
1 |
LOC_Os03g44380 |
GO:0009414 |
# |
# |
# |
# |
# |
|
|
|
|
|
|
| |
2 |
LOC_Os04g52090 |
GO:0009414 |
# |
# |
# |
# |
# |
|
|
|
|
|
|
|
| |
LOC_Os03g44380-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
LOC_Os04g52090-AP2 domain containing protein, expressed
|
GO:0009414-response to water deprivation
|
|
|
|
|
