Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  21398647 1.B F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank Accession No for OsNCED1-AY838897(LOC_Os02g47510);OsNCED3-AY838899(LOC_Os03g44380)back reference-19208695.Statistically significant difference was calculated at P<0.05 .  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] # # 7.55522
grp_1_1_1
 
  1 2 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 1h # 3.42083  
  1 3 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 2h # 3.32058  
  1 4 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h # 3.53088  
  1 5 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 30m # 2.87939  
  1 6 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 1h # 2.50358  
  1 7 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 2h # 2.2654  
  1 8 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 4h # 3.82083  
  1 9 LOC_Os02g47510 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 8h # 2.23801  
 
LOC_Os02g47510-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
h-Hours
m-Minutes
MCP:1000518-seedling development stage
PO:0025034-leaf
EO:0007383-watering regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] # # 0.96903
grp_2_1_1
 
  2 2 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 1h # 4.17936  
  2 3 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 2h # 7.94143  
  2 4 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h # 2.18614  
  2 5 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 30m # 1.49978  
  2 6 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 1h # 1.0206  
  2 7 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 2h # 0.88627  
  2 8 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 4h # 0.92425  
  2 9 LOC_Os03g44380 # # 39946 CU:237 # WT # PO:0025034[#] MCP:1000518[2w] MCE:1000016 15% 4h EO:0007383 8h # 0.96213  
 
LOC_Os03g44380-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
h-Hours
m-Minutes
MCP:1000518-seedling development stage
PO:0025034-leaf
EO:0007383-watering regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  21398647 1.B F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank Accession No for OsNCED1-AY838897(LOC_Os02g47510);OsNCED3-AY838899(LOC_Os03g44380)back reference-19208695.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os02g47510 GO:0009414 # # # # #            
  2 LOC_Os03g44380 GO:0009414 # # # # #            
 
LOC_Os02g47510-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
LOC_Os03g44380-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
GO:0009414-response to water deprivation
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India