Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  21398647 4.B F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank Accession No for OsCATA-AK099923(LOC_Os02g02400)OsCATB-AK069446(LOC_Os06g51150);OsCATC-AK066378(LOC_Os03g03910). .Statistically significant difference was calculated at P<0.05 .  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] # 6am # 6.16183
grp_1_1_1
 
  1 2 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] # 10am # 14.54504
grp_1_2_1
 
  1 3 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] # 2pm # 23.45375
grp_1_3_1
 
  1 4 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] # 6pm # 36.3024
grp_1_4_1
 
  1 5 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] # 10pm # 27.21886
grp_1_5_1
 
  1 6 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] # 2am # 11.96241
grp_1_6_1
 
 
LOC_Os02g02400-catalase isozyme A, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
am-
pm-
MCP:1000518-seedling development stage
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] EO:0007270 6am # 9.31378  
  2 2 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] EO:0007270 10am # 13.1004  
  2 3 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] EO:0007270 2pm # 17.80683  
  2 4 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] EO:0007270 6pm # 28.948  
  2 5 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] EO:0007270 10pm # 22.22826  
  2 6 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[#] EO:0007270 2am # 11.04292  
 
LOC_Os02g02400-catalase isozyme A, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
am-
pm-
MCP:1000518-seedling development stage
PO:0020104-leaf sheath
EO:0007270-continuous dark (no light) regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6am # 3.6667
grp_3_1_1
 
  3 2 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10am # 5.48367
grp_3_2_1
 
  3 3 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2pm # 5.46167
grp_3_3_1
 
  3 4 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6pm # 8.19713
grp_3_4_1
 
  3 5 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10pm # 8.83196
grp_3_5_1
 
  3 6 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2am # 6.84065
grp_3_6_1
 
 
LOC_Os06g51150-catalase isozyme B, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 6am # 8.13163  
  4 2 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 10am # 8.13163  
  4 3 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 2pm # 7.7163  
  4 4 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 6pm # 7.30014  
  4 5 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 10pm # 11.87508  
  4 6 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 2am # 13.03523  
 
LOC_Os06g51150-catalase isozyme B, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
EO:0007270-continuous dark (no light) regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6am # 4.47685
grp_5_1_1
 
  5 2 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10am # 29.53899
grp_5_2_1
 
  5 3 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2pm # 64.451
grp_5_3_1
 
  5 4 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6pm # 49.06355
grp_5_4_1
 
  5 5 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10pm # 63.35651
grp_5_5_1
 
  5 6 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2am # 36.54339
grp_5_6_1
 
 
LOC_Os03g03910-catalase domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 6am # 34.81425  
  6 2 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 10am # 42.67197  
  6 3 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 2pm # 68.12861  
  6 4 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 6pm # 43.81046  
  6 5 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 10pm # 55.34546  
  6 6 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] EO:0007270 2am # 23.80408  
 
LOC_Os03g03910-catalase domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
EO:0007270-continuous dark (no light) regimen
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  21398647 4.B F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank Accession No for OsCATA-AK099923(LOC_Os02g02400)OsCATB-AK069446(LOC_Os06g51150);OsCATC-AK066378(LOC_Os03g03910).  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os02g02400 GO:0009646 # # # # #            
  2 LOC_Os03g03910 GO:0009646 # # # # #            
 
LOC_Os02g02400-catalase isozyme A, putative, expressed
LOC_Os03g03910-catalase domain containing protein, expressed
GO:0009646-response to absence of light
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India