Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  21398647 4.C F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank Accession No for OsCATA-AK099923(LOC_Os02g02400)OsCATB-AK069446(LOC_Os06g51150);OsCATC-AK066378(LOC_Os03g03910).Statistically significant difference was calculated at P<0.05 .  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] # 6am # 7.24305
grp_1_1_1
 
  1 2 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] # 10am # 14.00657
grp_1_2_1
 
  1 3 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] # 2pm # 5.81347
grp_1_3_1
 
  1 4 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] # 6pm # 23.95704
grp_1_4_1
 
  1 5 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] # 10pm # 37.09492
grp_1_5_1
 
  1 6 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] # 2am # 28.28855
grp_1_6_1
 
 
LOC_Os02g02400-catalase isozyme A, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] MCE:1000016 12% 6am # 13.23056  
  2 2 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] MCE:1000016 12% 10am # 13.23056  
  2 3 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] MCE:1000016 12% 2pm # 8.34669  
  2 4 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] MCE:1000016 12% 6pm # 9.10255  
  2 5 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] MCE:1000016 12% 10pm # 14.5174  
  2 6 LOC_Os02g02400 # # 39946 CU:237 # WT # PO:0020104[#] MCP:1000518[2w] MCE:1000016 12% 2am # 23.36454  
 
LOC_Os02g02400-catalase isozyme A, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020104-leaf sheath
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6am # 17.37764
grp_3_1_1
 
  3 2 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10am # 12.24951
grp_3_2_1
 
  3 3 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2pm # 4.42341
grp_3_3_1
 
  3 4 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6pm # 5.91529
grp_3_4_1
 
  3 5 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10pm # 8.89875
grp_3_5_1
 
  3 6 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2am # 8.89875
grp_3_6_1
 
 
LOC_Os06g51150-catalase isozyme B, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 6am # 9.53201  
  4 2 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 10am # 6.97802  
  4 3 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 2pm # 5.28156  
  4 4 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 6pm # 16.58055  
  4 5 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 10pm # 33.02844  
  4 6 LOC_Os06g51150 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 2am # 28.02306  
 
LOC_Os06g51150-catalase isozyme B, putative, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6am # 22.89431
grp_5_1_1
 
  5 2 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10am # 19.72767
grp_5_2_1
 
  5 3 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2pm # 29.43234
grp_5_3_1
 
  5 4 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 6pm # 63.53374
grp_5_4_1
 
  5 5 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 10pm # 49.21069
grp_5_5_1
 
  5 6 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] # 2am # 63.32962
grp_5_6_1
 
 
LOC_Os03g03910-catalase domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 6am # 36.86989  
  6 2 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 10am # 35.41939  
  6 3 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 2pm # 25.38662  
  6 4 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 6pm # 54.09425  
  6 5 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 10pm # 32.90601  
  6 6 LOC_Os03g03910 # # 39946 CU:237 # WT # PO:0020039[#] MCP:1000518[2w] MCE:1000016 12% 2am # 34.64276  
 
LOC_Os03g03910-catalase domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:237-Yangdao 6
WT-Wild Type
w-Weeks
am-
pm-
MCP:1000518-seedling development stage
PO:0020039-leaf lamina
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  21398647 4.C F Gene expression analysis (transcription) : Quantitative RT-PCR GenBank Accession No for OsCATA-AK099923(LOC_Os02g02400)OsCATB-AK069446(LOC_Os06g51150);OsCATC-AK066378(LOC_Os03g03910).Statistically significant difference was calculated at P<0.05 .  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os02g02400 GO:0009414 # # # # #            
  2 LOC_Os03g03910 GO:0009414 # # # # #            
  3 LOC_Os06g51150 GO:0009414 # # # # #            
 
LOC_Os02g02400-catalase isozyme A, putative, expressed
LOC_Os03g03910-catalase domain containing protein, expressed
LOC_Os06g51150-catalase isozyme B, putative, expressed
GO:0009414-response to water deprivation
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India