Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  21697258 6.C F Gene expression analysis (transcription) : Quantitative RT-PCR RAP database Id for OsNRAMP1(LOC_Os07g15460)- Os07g0258400. Results are expressed as 100000 gene copies / microgram total RNA.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os07g15460 # # 39947 CU:113 # WT # PO:0009005[#] MCP:1000518[3w] # 7d # 0.32840058
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os07g15460 # # 39947 CU:113 # WT # PO:0009005[#] MCP:1000518[3w] MCE:1000143 7d # 7.4173737
grp_1_2_1
 
  1 3 LOC_Os07g15460 # # 39946 CU:031 # WT # PO:0009005[#] MCP:1000518[3w] # 7d # 1.9210179
grp_1_3_1
 
  1 4 LOC_Os07g15460 # # 39946 CU:031 # WT # PO:0009005[#] MCP:1000518[3w] MCE:1000143 7d # 5.792283  
 
LOC_Os07g15460-metal transporter Nramp6, putative, expressed
39946-Oryza sativa (indica group)
39947-Oryza sativa japonica group
CU:031-cv. Habataki
CU:113-cv. Sasanishiki
WT-Wild Type
w-Weeks
d-Days
MCP:1000518-seedling development stage
PO:0009005-root
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os07g15460 # # 39947 CU:113 # WT # PO:0009006[#] MCP:1000518[3w] # 7d # 0.07849951
grp_2_1_1
grp_2_1_2
 
  2 2 LOC_Os07g15460 # # 39947 CU:113 # WT # PO:0009006[#] MCP:1000518[3w] MCE:1000143 7d # 4.58085
grp_2_2_1
 
  2 3 LOC_Os07g15460 # # 39946 CU:031 # WT # PO:0009006[#] MCP:1000518[3w] # 7d # 0.12780787
grp_2_3_1
 
  2 4 LOC_Os07g15460 # # 39946 CU:031 # WT # PO:0009006[#] MCP:1000518[3w] MCE:1000143 7d # 3.3039684  
 
LOC_Os07g15460-metal transporter Nramp6, putative, expressed
39946-Oryza sativa (indica group)
39947-Oryza sativa japonica group
CU:031-cv. Habataki
CU:113-cv. Sasanishiki
WT-Wild Type
w-Weeks
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  21697258 6.C F Gene expression analysis (transcription) : Quantitative RT-PCR RAP database Id for OsNRAMP1(LOC_Os07g15460)- Os07g0258400.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os07g15460 GO:0010106 # # # # #            
 
LOC_Os07g15460-metal transporter Nramp6, putative, expressed
GO:0010106-cellular response to iron ion starvation
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India