Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  22589467 1.A F Gene expression analysis (transcription) : Quantitative RT-PCR RAP-db Id for OsNRAMP5 (LOC_Os07g15370)-Os07g0257200. Statistically significant difference was calculated by Dunnett’s test, at P < 0.05.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009005[#] MCP:1000518[6w] # # 0.41490793  
  1 2 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000085[#] MCP:1000518[6w] # # 0.048972  
  1 3 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020104[#] MCP:1000518[6w] # # 0.09773774  
  1 4 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020039[#] MCP:1000518[6w] # # 0.03179875  
  1 5 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009005[#] PO:0007073[9w] # # 0.27932107  
  1 6 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000085[#] PO:0007073[9w] # # 0.03252449  
  1 7 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020104[#] PO:0007073[9w] # # 0.04601175  
  1 8 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020039[#] PO:0007073[9w] # # 0.03737165  
  1 9 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009005[#] PO:0007014[12w] # # 1.0084695  
  1 10 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000085[#] PO:0007014[12w] # # 0.09993786  
  1 11 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020104[#] PO:0007014[12w] # # 0.12217980  
  1 12 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020039[#] PO:0007014[12w] # # 0.05189787  
  1 13 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009049[#] MCP:1000520[#] PO:0007014[12w] # # 0.07415509  
  1 14 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009005[#] PO:0007616[14w] # # 1
grp_1_14_1
 
  1 15 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000085[#] PO:0007616[14w] # # 0.13226373  
  1 16 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020104[#] PO:0007616[14w] # # 0.04871608  
  1 17 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020039[#] PO:0007616[14w] # # 0.01810142  
  1 18 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020103[#] PO:0020104[#] PO:0007616[14w] # # 0.03155048  
  1 19 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020103[#] PO:0020039[#] PO:0007616[14w] # # 0.02304789  
  1 20 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000097[#] PO:0007616[14w] # # 0.08061415  
  1 21 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000432[#] PO:0007616[14w] # # 0.02349861  
  1 22 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000237[#] PO:0007616[14w] # # 0.02371251  
  1 23 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000440[#] PO:0007616[14w] # # 0.01516409  
  1 24 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009053[#] PO:0007616[14w] # # 0.00661567  
  1 25 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020122[#] PO:0007616[14w] # # 0.01564537  
  1 26 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009051[#] PO:0007616[14w] # # 0.13502154  
  1 27 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009005[#] PO:0007001[16w] # # 1.2075737  
  1 28 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000085[#] PO:0007001[16w] # # 0.36962953  
  1 29 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020104[#] PO:0007001[16w] # # 0.03456038  
  1 30 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0020039[#] PO:0007001[16w] # # 0.01275388  
  1 31 LOC_Os07g15370 # # 39947 CU:100 # WT # MCP:1000440[#] PO:0007001[16w] # # 0.01295250  
  1 32 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009054[#] PO:0007001[16w] # # 0.01323515  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
WT-Wild Type
w-Weeks
MCP:1000085-lower shoot
MCP:1000097-third shoot internode
MCP:1000237-second shoot internode
MCP:1000432-second shoot node from top
MCP:1000440-first shoot node
MCP:1000518-seedling development stage
MCP:1000520-young inflorescence stage
PO:0007001-FR.01 early stage of fruit ripening
PO:0007014-booting
PO:0007073-2 formation of axillary shoot
PO:0007616-4 anthesis
PO:0009005-root
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0009053-peduncle
PO:0009054-inflorescence bract
PO:0020039-leaf lamina
PO:0020103-flag leaf
PO:0020104-leaf sheath
PO:0020122-inflorescence axis
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India