Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  22589467 5.E F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) RAP-db Id for OsNRAMP5 (LOC_Os07g15370)-Os07g0257200. Concentration of different metals in straw, of plants grown in soil culture, was measured. Statistically significant difference was calculated by Dunnett’s test at *P < 0.05.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Milligrams/kilogram dry weight  
  1 1 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000521[4m] # TO:0006048 4065.5737
grp_1_1_1
 
  1 2 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 5 PO:0009006[#] MCP:1000521[4m] # TO:0006048 232.63158  
  1 3 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 9 PO:0009006[#] MCP:1000521[4m] # TO:0006048 210.52632  
  1 4 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 25 PO:0009006[#] MCP:1000521[4m] # TO:0006048 149.47368  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
m-Months
MCP:1000521-mature plant stage
PO:0009006-shoot system
TO:0006048-manganese concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Milligrams/kilogram dry weight  
  2 1 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000521[4m] # TO:0006049 106.31579
grp_2_1_1
 
  2 2 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 5 PO:0009006[#] MCP:1000521[4m] # TO:0006049 69.47369  
  2 3 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 9 PO:0009006[#] MCP:1000521[4m] # TO:0006049 81.052635  
  2 4 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 25 PO:0009006[#] MCP:1000521[4m] # TO:0006049 70.52631  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
m-Months
MCP:1000521-mature plant stage
PO:0009006-shoot system
TO:0006049-iron concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Milligrams/kilogram dry weight  
  3 1 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000521[4m] # TO:0006053 216.8421
grp_3_1_1
 
  3 2 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 5 PO:0009006[#] MCP:1000521[4m] # TO:0006053 184.21053  
  3 3 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 9 PO:0009006[#] MCP:1000521[4m] # TO:0006053 168.73738  
  3 4 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 25 PO:0009006[#] MCP:1000521[4m] # TO:0006053 173.0381  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
m-Months
MCP:1000521-mature plant stage
PO:0009006-shoot system
TO:0006053-zinc concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Milligrams/kilogram dry weight  
  4 1 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000521[4m] # TO:0006052 32.63158
grp_4_1_1
 
  4 2 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 5 PO:0009006[#] MCP:1000521[4m] # TO:0006052 37.894737  
  4 3 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 9 PO:0009006[#] MCP:1000521[4m] # TO:0006052 35.789474  
  4 4 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 25 PO:0009006[#] MCP:1000521[4m] # TO:0006052 33.68421  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
m-Months
MCP:1000521-mature plant stage
PO:0009006-shoot system
TO:0006052-copper concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Milligrams/kilogram dry weight  
  5 1 LOC_Os07g15370 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000521[4m] # TO:0006059 6.817416
grp_5_1_1
 
  5 2 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 5 PO:0009006[#] MCP:1000521[4m] # TO:0006059 1.195843  
  5 3 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 9 PO:0009006[#] MCP:1000521[4m] # TO:0006059 0.9351968  
  5 4 LOC_Os07g15370 LOC_Os07g15370 PR:007 39947 CU:100 # TRI 25 PO:0009006[#] MCP:1000521[4m] # TO:0006059 0.6756256  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
m-Months
MCP:1000521-mature plant stage
PO:0009006-shoot system
TO:0006059-cadmium concentration
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India