Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  22589467 9.B F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) RAP-db Id for OsNRAMP5 (LOC_Os07g15370)-Os07g0257200. The seedlings (28 d old) were exposed to a nutrient solution without Mn for 1 week & then subjected to an uptake solution containing various concentrations of Mn. Net uptake was calculated by subtracting the apparent uptake at 4蚓 from that at 25蚓.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. milligrams/kilogram dry weight/hour  
  1 1 LOC_Os07g15370 # # 39947 CU:138 # WT # PO:0009005[#] MCP:1000518[28d] # 30m MCT:1000559 10.381391
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os07g15370 LOC_Os07g15370 # 39947 CU:138 # TDNA # PO:0009005[#] MCP:1000518[28d] # 30m MCT:1000559 0
grp_1_2_1
 
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
TDNA-TDNA mutant
WT-Wild Type
d-Days
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
MCT:1000559-net manganese uptake
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. milligrams/kilogram dry weight/hour  
  2 1 LOC_Os07g15370 # # 39947 CU:138 # WT # PO:0009005[#] MCP:1000518[28d] EO:0007387 5然 30m MCT:1000559 86.85402
grp_2_1_1
 
  2 2 LOC_Os07g15370 LOC_Os07g15370 # 39947 CU:138 # TDNA # PO:0009005[#] MCP:1000518[28d] EO:0007387 5然 30m MCT:1000559 1.4723791  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
TDNA-TDNA mutant
WT-Wild Type
d-Days
-
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007387-manganese nutrient regimen
MCT:1000559-net manganese uptake
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. milligrams/kilogram dry weight/hour  
  3 1 LOC_Os07g15370 # # 39947 CU:138 # WT # PO:0009005[#] MCP:1000518[28d] EO:0007387 10然 30m MCT:1000559 83.66603
grp_3_1_1
 
  3 2 LOC_Os07g15370 LOC_Os07g15370 # 39947 CU:138 # TDNA # PO:0009005[#] MCP:1000518[28d] EO:0007387 10然 30m MCT:1000559 2.3094966  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
TDNA-TDNA mutant
WT-Wild Type
d-Days
-
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007387-manganese nutrient regimen
MCT:1000559-net manganese uptake
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. milligrams/kilogram dry weight/hour  
  4 1 LOC_Os07g15370 # # 39947 CU:138 # WT # PO:0009005[#] MCP:1000518[28d] EO:0007387 50然 30m MCT:1000559 95.86946
grp_4_1_1
 
  4 2 LOC_Os07g15370 LOC_Os07g15370 # 39947 CU:138 # TDNA # PO:0009005[#] MCP:1000518[28d] EO:0007387 50然 30m MCT:1000559 10.275958  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
TDNA-TDNA mutant
WT-Wild Type
d-Days
-
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007387-manganese nutrient regimen
MCT:1000559-net manganese uptake
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. milligrams/kilogram dry weight/hour  
  5 1 LOC_Os07g15370 # # 39947 CU:138 # WT # PO:0009005[#] MCP:1000518[28d] EO:0007387 100然 30m MCT:1000559 79.87382
grp_5_1_1
 
  5 2 LOC_Os07g15370 LOC_Os07g15370 # 39947 CU:138 # TDNA # PO:0009005[#] MCP:1000518[28d] EO:0007387 100然 30m MCT:1000559 20.339718  
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
TDNA-TDNA mutant
WT-Wild Type
d-Days
-
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007387-manganese nutrient regimen
MCT:1000559-net manganese uptake
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  22589467 9.B F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) RAP-db Id for OsNRAMP5 (LOC_Os07g15370)-Os07g0257200.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os07g15370 GO:0006828 # # # # #            
 
LOC_Os07g15370-metal transporter Nramp6, putative, expressed
GO:0006828-manganese ion transport
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India