Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  22869603 5.D F Gene expression analysis (transcription) : Quantitative RT-PCR SodCc2-LOC_Os03g22810,CatB-LOC_Os06g51150 (Primer BLAST).The protoplasts were treated with 10 μM ABA for 5 min, and the relative expression levels of SodCc2 and CatB were analyzed by real-time quantitative PCR.Statistically significant difference was calculated at P<0.05 . When plants were ~48 inches tall, the protoplasts from the leaf and stem tissue were isolated.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os03g22810 # # 39947 CU:100 # WT # PO:0025034[#] PO:0009047[#] PO:0000006[#] # 5m # 1.00165
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os03g22810 # # 39947 CU:100 # WT # PO:0025034[#] PO:0009047[#] PO:0000006[#] EO:0007105 10M 5m # 1.59057
grp_1_2_1
 
  1 3 LOC_Os03g22810 LOC_Os05g41090 PR:99 39947 CU:100 # TRI # PO:0025034[#] PO:0009047[#] PO:0000006[#] # 5m # 0.76917
grp_1_3_1
 
  1 4 LOC_Os03g22810 LOC_Os05g41090 PR:99 39947 CU:100 # TRI # PO:0025034[#] PO:0009047[#] PO:0000006[#] EO:0007105 10M 5m # 0.48095  
 
LOC_Os03g22810-copper/zinc superoxide dismutase, putative, expressed
LOC_Os05g41090-CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
PR:99-T7 Promoter from bacteriophage
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
M-
m-Minutes
PO:0000006-plant protoplast
PO:0009047-stem
PO:0025034-leaf
EO:0007105-abscisic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os06g51150 # # 39947 CU:100 # WT # PO:0025034[#] PO:0009047[#] PO:0000006[#] # 5m # 1.00679
grp_2_1_1
grp_2_1_2
 
  2 2 LOC_Os06g51150 # # 39947 CU:100 # WT # PO:0025034[#] PO:0009047[#] PO:0000006[#] EO:0007105 10M 5m # 1.46407
grp_2_2_1
 
  2 3 LOC_Os06g51150 LOC_Os05g41090 PR:99 39947 CU:100 # TRI # PO:0025034[#] PO:0009047[#] PO:0000006[#] # 5m # 0.65129
grp_2_3_1
 
  2 4 LOC_Os06g51150 LOC_Os05g41090 PR:99 39947 CU:100 # TRI # PO:0025034[#] PO:0009047[#] PO:0000006[#] EO:0007105 10M 5m # 0.59105  
 
LOC_Os05g41090-CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
LOC_Os06g51150-catalase isozyme B, putative, expressed
PR:99-T7 Promoter from bacteriophage
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
M-
m-Minutes
PO:0000006-plant protoplast
PO:0009047-stem
PO:0025034-leaf
EO:0007105-abscisic acid regimen
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India