Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  23094910 4.v F Gene expression analysis (transcription) : Quantitative RT-PCR AK102475-LOC_Os11g08210; OsNAC10-AK069257-LOC_Os11g03300(PMID-20335401); Os07g0154100-LOC_Os07g05940. NT is taken as wild type.Fig 4 has been split into 11 parts.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os07g05940 # # 39947 CU:100 # WT # PO:0009005[#] MCP:1000518[14d] # # 1
grp_1_1_1
 
  1 2 LOC_Os07g05940 LOC_Os11g08210 PR:26 39947 CU:100 # TOE # PO:0009005[#] MCP:1000518[14d] # # 6.70982  
  1 3 LOC_Os07g05940 LOC_Os11g08210 PR:27 39947 CU:100 # TOE # PO:0009005[#] MCP:1000518[14d] # # 8.48631  
 
LOC_Os07g05940-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
LOC_Os11g08210-no apical meristem protein, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
PR:27-GOS2 , AF094774
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOE-Transgenic overexpression
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009005-root
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os07g05940 # # 39947 CU:100 # WT # PO:0009005[#] MCP:1000518[14d] # # 1
grp_2_1_1
 
  2 2 LOC_Os07g05940 LOC_Os11g03300 PR:26 39947 CU:100 # TOE # PO:0009005[#] MCP:1000518[14d] # # 27.39221  
  2 3 LOC_Os07g05940 LOC_Os11g03300 PR:27 39947 CU:100 # TOE # PO:0009005[#] MCP:1000518[14d] # # 11.23989  
 
LOC_Os07g05940-9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
LOC_Os11g03300-NAC domain transcription factor, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
PR:27-GOS2 , AF094774
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOE-Transgenic overexpression
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009005-root
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India