Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  23777258 7.A F Gene expression analysis (transcription) : Semi-quantitative RT-PCR OsMPK1-LOC_Os06g06090;SodCc2-LOC_Os03g22810; CatB-LOC_Os06g51150;OsIPD3-LOC_Os06g02520; OsDMI3-LOC_Os05g41090(Primer BLAST).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os06g02520 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] # 5m # 1
grp_1_1_1
 
  1 2 LOC_Os06g02520 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] # 5m # 0  
  1 3 LOC_Os06g02520 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2
grp_1_3_1
 
  1 4 LOC_Os06g02520 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 0  
 
LOC_Os06g02520-interacting protein of DMI3, putative, expressed
PR:99-T7 Promoter from bacteriophage
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
-
m-Minutes
MCP:1000315-second leaf from base
PO:0001053-3 leaf fully expanded
EO:0007105-abscisic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os03g22810 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] # 5m # 1
grp_2_1_1
 
  2 2 LOC_Os03g22810 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] # 5m # 1  
  2 3 LOC_Os03g22810 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2
grp_2_3_1
 
  2 4 LOC_Os03g22810 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2  
 
LOC_Os03g22810-copper/zinc superoxide dismutase, putative, expressed
LOC_Os06g02520-interacting protein of DMI3, putative, expressed
PR:99-T7 Promoter from bacteriophage
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
-
m-Minutes
MCP:1000315-second leaf from base
PO:0001053-3 leaf fully expanded
EO:0007105-abscisic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os06g51150 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] # 5m # 1
grp_3_1_1
 
  3 2 LOC_Os06g51150 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] # 5m # 1  
  3 3 LOC_Os06g51150 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2
grp_3_3_1
 
  3 4 LOC_Os06g51150 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2  
 
LOC_Os06g02520-interacting protein of DMI3, putative, expressed
LOC_Os06g51150-catalase isozyme B, putative, expressed
PR:99-T7 Promoter from bacteriophage
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
-
m-Minutes
MCP:1000315-second leaf from base
PO:0001053-3 leaf fully expanded
EO:0007105-abscisic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os06g06090 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] # 5m # 1
grp_4_1_1
 
  4 2 LOC_Os06g06090 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] # 5m # 1  
  4 3 LOC_Os06g06090 # # 39947 CU:100 # WT # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2
grp_4_3_1
 
  4 4 LOC_Os06g06090 LOC_Os06g02520 PR:99 39947 CU:100 # TRI # MCP:1000315[#] PO:0001053[#] EO:0007105 10然 5m # 2  
 
LOC_Os06g02520-interacting protein of DMI3, putative, expressed
LOC_Os06g06090-CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
PR:99-T7 Promoter from bacteriophage
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TRI-Transgenic RNAi
WT-Wild Type
-
m-Minutes
MCP:1000315-second leaf from base
PO:0001053-3 leaf fully expanded
EO:0007105-abscisic acid regimen
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India