Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  23808500 4.H F Relative water content measurement GenBank id for OsSUV3(LOC_Os03g53500 )-GQ982584. Statistically significant difference was calculated at P < 0.05, P < 0.01 and P < 0.001.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Percent  
  1 1 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0008037[#] MCP:1000518[21d] # TO:0000136 80.56551
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 1h TO:0000136 77.25504
grp_1_2_1
 
  1 3 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 6h TO:0000136 56.83931
grp_1_3_1
 
  1 4 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 12h TO:0000136 40.04339
grp_1_4_1
 
  1 5 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 24h TO:0000136 28.18029
grp_1_5_1
 
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
WT-Wild Type
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000136-relative water content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Percent  
  2 1 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0008037[#] MCP:1000518[21d] # TO:0000136 78.1341
grp_2_1_1
grp_2_1_2
 
  2 2 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 1h TO:0000136 77.12346
grp_2_2_1
 
  2 3 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 6h TO:0000136 76.77212
grp_2_3_1
 
  2 4 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 12h TO:0000136 65.89725
grp_2_4_1
 
  2 5 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 24h TO:0000136 30.68029
grp_2_5_1
 
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TC-Empty vector
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000136-relative water content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Percent  
  3 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0008037[#] MCP:1000518[21d] # TO:0000136 88.85358
grp_3_1_1
 
  3 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 1h TO:0000136 90.47872  
  3 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 6h TO:0000136 80.58791  
  3 4 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 12h TO:0000136 79.91181  
  3 5 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 24h TO:0000136 61.79451  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000136-relative water content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Percent  
  4 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0008037[#] MCP:1000518[21d] # TO:0000136 87.73516
grp_4_1_1
 
  4 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 1h TO:0000136 92.97592  
  4 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 6h TO:0000136 79.13774  
  4 4 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 12h TO:0000136 70.89586  
  4 5 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 24h TO:0000136 51.46556  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000136-relative water content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Percent  
  5 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0008037[#] MCP:1000518[21d] # TO:0000136 89.90482
grp_5_1_1
 
  5 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 1h TO:0000136 89.88662  
  5 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 6h TO:0000136 70.45493  
  5 4 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 12h TO:0000136 66.15901  
  5 5 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0008037[#] MCP:1000518[21d] EO:0007048 200mM 24h TO:0000136 49.68645  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000136-relative water content
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  23808500 4.H F Relative water content measurement GenBank id for OsSUV3(LOC_Os03g53500 )-GQ982584.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os03g53500 GO:0009651 # # # # #            
  2 LOC_Os03g53500 GO:0042538 # # # # #            
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
GO:0009651-response to salt stress
GO:0042538-hyperosmotic salinity response
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India