Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24142111 8 F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) OsPIP2;4-AK072632-LOC_Os07g26630; OsPIP2;7-AK109439-LOC_Os09g36930(from back-back ref-16033806). Plants were first grown on solid medium containing 0.5 MS with normal boric acid for 3 weeks and subsequently incubated in liquid medium for 4 days to acclimatize. significance level is considered as P<0.05.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram dry weight  
  1 1 LOC_Os07g26630 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] # MCT:1000550 220.76028
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os07g26630 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 1h MCT:1000550 110.17456
grp_1_2_1
 
  1 3 LOC_Os07g26630 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 2h MCT:1000550 77.19017
grp_1_3_1
 
  1 4 LOC_Os07g26630 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 3h MCT:1000550 43.09588
grp_1_4_1
 
 
LOC_Os07g26630-
3702-Arabidopsis thaliana
CU:171-Columbia
WT-Wild Type
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
MCE:1000300-boron deficiency treatment
MCE:1000308-10B enriched boric acid
MCT:1000550-root boron concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram dry weight  
  2 1 LOC_Os07g26630 LOC_Os07g26630 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] # MCT:1000550 333.83951
grp_2_1_1
grp_2_1_2
 
  2 2 LOC_Os07g26630 LOC_Os07g26630 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 1h MCT:1000550 81.34475
grp_2_2_1
 
  2 3 LOC_Os07g26630 LOC_Os07g26630 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 2h MCT:1000550 52.79621
grp_2_3_1
 
  2 4 LOC_Os07g26630 LOC_Os07g26630 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 3h MCT:1000550 57.50952
grp_2_4_1
 
 
LOC_Os07g26630-
PR:128-ACT2 from Arabidopsis
3702-Arabidopsis thaliana
CU:171-Columbia
TOE-Transgenic overexpression
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
MCE:1000300-boron deficiency treatment
MCE:1000308-10B enriched boric acid
MCT:1000550-root boron concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram dry weight  
  3 1 LOC_Os09g36930 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] # MCT:1000550 220.76028
grp_3_1_1
grp_3_1_2
 
  3 2 LOC_Os09g36930 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 1h MCT:1000550 110.17456
grp_3_2_1
 
  3 3 LOC_Os09g36930 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 2h MCT:1000550 77.19017
grp_3_3_1
 
  3 4 LOC_Os09g36930 # # 3702 CU:171 # WT # PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 3h MCT:1000550 43.09588
grp_3_4_1
 
 
LOC_Os09g36930-
3702-Arabidopsis thaliana
CU:171-Columbia
WT-Wild Type
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
MCE:1000300-boron deficiency treatment
MCE:1000308-10B enriched boric acid
MCT:1000550-root boron concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram dry weight  
  4 1 LOC_Os09g36930 LOC_Os09g36930 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] # MCT:1000550 352.69025
grp_4_1_1
 
  4 2 LOC_Os09g36930 LOC_Os09g36930 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 1h MCT:1000550 94.64975  
  4 3 LOC_Os09g36930 LOC_Os09g36930 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 2h MCT:1000550 62.77527  
  4 4 LOC_Os09g36930 LOC_Os09g36930 PR:128 3702 CU:171 # TOE 16 PO:0008037[#] MCP:1000518[25d] MCE:1000308 5mM 3h MCE:1000300 3h MCT:1000550 34.22924  
 
LOC_Os09g36930-
PR:128-ACT2 from Arabidopsis
3702-Arabidopsis thaliana
CU:171-Columbia
TOE-Transgenic overexpression
d-Days
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
MCE:1000300-boron deficiency treatment
MCE:1000308-10B enriched boric acid
MCT:1000550-root boron concentration
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  24142111 8 F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) OsPIP2;4-AK072632-LOC_Os07g26630; OsPIP2;7-AK109439-LOC_Os09g36930(from back-back ref-16033806).  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 # # # # #            
  2 LOC_Os07g26630 GO:0006811 # # # # #            
  3 LOC_Os07g26630 GO:0010036 # # # # #            
  4 LOC_Os09g36930 GO:0006811 # # # # #            
  5 LOC_Os09g36930 GO:0010036 # # # # #            
 
-
LOC_Os07g26630-
LOC_Os09g36930-
-
GO:0006811-ion transport
GO:0010036-response to boron-containing substance
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India