Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24389954 2.v T Gene expression analysis (transcription) : Quantitative RT-PCR GenBank accession Id for ANS (CAA69252, closest RGAP Id-LOC_Os01g27490)-Y07955. There is a discrepancy regarding endosperm dev stage as it is quoted as 7 DAF in material and method and 5 DAF in figure legend.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 CAA69252 # # 39947 CU:100 # WT # PO:0009001[#] MCP:1000489[#] # # 1
grp_1_1_1
 
  1 2 CAA69252 # # 39947 CU:224 # WT # PO:0009001[#] MCP:1000489[#] # # 0.23  
  1 3 CAA69252 # # 39947 CU:226 # WT # PO:0009001[#] MCP:1000489[#] # # 32.2  
  1 4 CAA69252 # # 39947 CU:225 # WT # PO:0009001[#] MCP:1000489[#] # # 0.96  
 
CAA69252-anthocyanidin synthase
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
CU:224-Akunemochi
CU:225-Chinakuromai
CU:226-Tsukushiakamochi
WT-Wild Type
MCP:1000489-3 days post-anthesis stage
PO:0009001-fruit
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 CAA69252 # # 39947 CU:100 # WT # PO:0009001[#] MCP:1000204[#] # # 1
grp_2_1_1
 
  2 2 CAA69252 # # 39947 CU:224 # WT # PO:0009001[#] MCP:1000204[#] # # 33.22  
  2 3 CAA69252 # # 39947 CU:226 # WT # PO:0009001[#] MCP:1000204[#] # # 767.12  
  2 4 CAA69252 # # 39947 CU:225 # WT # PO:0009001[#] MCP:1000204[#] # # 102.12  
 
CAA69252-anthocyanidin synthase
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
CU:224-Akunemochi
CU:225-Chinakuromai
CU:226-Tsukushiakamochi
WT-Wild Type
MCP:1000204-5 days post-anthesis stage
PO:0009001-fruit
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 CAA69252 # # 39947 CU:100 # WT # PO:0009001[#] MCP:1000288[#] # # 1
grp_3_1_1
 
  3 2 CAA69252 # # 39947 CU:224 # WT # PO:0009001[#] MCP:1000288[#] # # 1.23  
  3 3 CAA69252 # # 39947 CU:226 # WT # PO:0009001[#] MCP:1000288[#] # # 4.49  
  3 4 CAA69252 # # 39947 CU:225 # WT # PO:0009001[#] MCP:1000288[#] # # 1.48  
 
CAA69252-anthocyanidin synthase
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
CU:224-Akunemochi
CU:225-Chinakuromai
CU:226-Tsukushiakamochi
WT-Wild Type
MCP:1000288-7 days post-anthesis stage
PO:0009001-fruit
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 CAA69252 # # 39947 CU:100 # WT # PO:0009089[#] MCP:1000288[#] # # 1
grp_4_1_1
 
  4 2 CAA69252 # # 39947 CU:224 # WT # PO:0009089[#] MCP:1000288[#] # # 1.39  
  4 3 CAA69252 # # 39947 CU:226 # WT # PO:0009089[#] MCP:1000288[#] # # ND  
  4 4 CAA69252 # # 39947 CU:225 # WT # PO:0009089[#] MCP:1000288[#] # # 2.5  
 
CAA69252-anthocyanidin synthase
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
CU:224-Akunemochi
CU:225-Chinakuromai
CU:226-Tsukushiakamochi
WT-Wild Type
MCP:1000288-7 days post-anthesis stage
PO:0009089-endosperm
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India