Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24410953 4.A F Gene expression analysis (transcription) : Quantitative RT-PCR OsETHE1- LOC_Os01g47690. For dehydration stress, seedlings were removed from media and kept on a 3-mm blotting paper. The fold change values have been coded instead of logarithmic (log with base 2) values, unlike the figure in the article.Statistically significant change in transcript levels indicated (*P <0.05, **P <0.001).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] # # 1
grp_1_1_1
 
  1 2 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] # # 1
grp_1_2_1
 
  1 3 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007048 200mM 30s # 0.8  
  1 4 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007048 200mM 30s # 0.4  
  1 5 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007048 200mM 1m # 0.4  
  1 6 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007048 200mM 1m # 1.1  
  1 7 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007048 200mM 10m # 0.4  
  1 8 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007048 200mM 10m # 0.7  
  1 9 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007048 200mM 30m # 1.1  
  1 10 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007048 200mM 30m # 0.5  
  1 11 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007048 200mM 1h # 0.7  
  1 12 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007048 200mM 1h # 0.7  
  1 13 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007048 200mM 6h # 0.7  
  1 14 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007048 200mM 6h # 3.9  
 
LOC_Os01g47690-metallo-beta-lactamase family protein, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
WT-Wild Type
d-Days
mM-millimolar
h-Hours
m-Minutes
s-
MCP:1000518-seedling development stage
PO:0009005-root
PO:0009006-shoot system
EO:0007048-sodium chloride regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] # # 1
grp_2_1_1
 
  2 2 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] # # 1
grp_2_2_1
 
  2 3 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] MCE:1000069 30s # 0.6  
  2 4 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] MCE:1000069 30s # 1.3  
  2 5 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] MCE:1000069 1m # 1  
  2 6 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] MCE:1000069 1m # 0.5  
  2 7 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] MCE:1000069 10m # 1  
  2 8 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] MCE:1000069 10m # 0.4  
  2 9 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] MCE:1000069 30m # 0.7  
  2 10 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] MCE:1000069 30m # 0.5  
  2 11 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] MCE:1000069 1h # 0.6  
  2 12 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] MCE:1000069 1h # 1.5  
  2 13 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] MCE:1000069 6h # 0.2  
  2 14 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] MCE:1000069 6h # 2.2  
 
LOC_Os01g47690-metallo-beta-lactamase family protein, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
WT-Wild Type
d-Days
h-Hours
m-Minutes
s-
MCP:1000518-seedling development stage
PO:0009005-root
PO:0009006-shoot system
MCE:1000069-dessication/dehydration stress
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] # # 1
grp_3_1_1
 
  3 2 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] # # 1
grp_3_2_1
 
  3 3 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007319 30s 42°C # 23.5  
  3 4 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007319 30s 42°C # 1.1  
  3 5 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007319 1m 42°C # 160.5  
  3 6 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007319 1m 42°C # 2.5  
  3 7 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007319 10m 42°C # 2.1  
  3 8 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007319 10m 42°C # 6.5  
  3 9 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007319 30m 42°C # 2.8  
  3 10 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007319 30m 42°C # 5.5  
  3 11 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007319 1h 42°C # 2.1  
  3 12 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007319 1h 42°C # 2.2  
  3 13 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009006[#] MCP:1000518[14d] EO:0007319 6h 42°C # 2.2  
  3 14 LOC_Os01g47690 # # 39946 CU:050 # WT # PO:0009005[#] MCP:1000518[14d] EO:0007319 6h 42°C # 13.2  
 
LOC_Os01g47690-metallo-beta-lactamase family protein, putative, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
WT-Wild Type
d-Days
h-Hours
m-Minutes
s-
MCP:1000518-seedling development stage
PO:0009005-root
PO:0009006-shoot system
EO:0007319-warm/hot air temperature regimen
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  24410953 4.A F Gene expression analysis (transcription) : Quantitative RT-PCR OsETHE1- LOC_Os01g47690.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os01g47690 GO:0006950 # # # # #            
  2 LOC_Os01g47690 GO:0009408 # # # # #            
  3 LOC_Os01g47690 GO:0009414 # # # # #            
  4 LOC_Os01g47690 GO:0009651 # # # # #            
 
LOC_Os01g47690-metallo-beta-lactamase family protein, putative, expressed
GO:0006950-response to stress
GO:0009408-response to heat
GO:0009414-response to water deprivation
GO:0009651-response to salt stress
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India