Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24410953 8.A,B F GUS activity assay : Fluorometry OsETHE1- LOC_Os01g47690.Statistically significant change in promoter activity compared with the control indicated (*P <0.05, **P <0.001).The activity is expressed as percentage relative to control.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d # 100
grp_1_1_1
 
  1 2 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 30m # 148.96706  
  1 3 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 1h # 131.34192  
  1 4 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 2h # 229.411  
  1 5 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 3h # 244.8158  
  1 6 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 4h # 227.18501  
  1 7 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 6h # 180.31902  
  1 8 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009006[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 24h # 207.17761  
 
AAB30197- beta-glucuronidase
PR:138-OsETHE1 (LOC_Os01g47690)
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
d-Days
h-Hours
m-Minutes
MCP:1000518-seedling development stage
PO:0009006-shoot system
EO:0007162-continuous light regimen
MCE:1000119-calcium chloride regimen (CaCl2)
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d # 100
grp_2_1_1
 
  2 2 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 30m # 315.86954  
  2 3 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 1h # 359.45132  
  2 4 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 2h # 491.67996  
  2 5 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 3h # 366.18335  
  2 6 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 4h # 335.51926  
  2 7 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 6h # 160.49893  
  2 8 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007162 7d MCE:1000119 5mM 24h # 325.76196  
 
AAB30197- beta-glucuronidase
PR:138-OsETHE1 (LOC_Os01g47690)
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
d-Days
h-Hours
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007162-continuous light regimen
MCE:1000119-calcium chloride regimen (CaCl2)
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d # 100
grp_3_1_1
 
  3 2 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 30m # 102.69822  
  3 3 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 1h # 122.54838  
  3 4 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 2h # 108.18081  
  3 5 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 3h # 54.81218  
  3 6 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 4h # 66.63693  
  3 7 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 6h # 58.693966  
  3 8 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # MCP:1000527[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 24h # 63.574253  
 
AAB30197- beta-glucuronidase
PR:138-OsETHE1 (LOC_Os01g47690)
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
d-Days
h-Hours
m-Minutes
MCP:1000518-seedling development stage
MCP:1000527-etiolated shoot
EO:0007270-continuous dark (no light) regimen
MCE:1000119-calcium chloride regimen (CaCl2)
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d # 100
grp_4_1_1
 
  4 2 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 30m # 99.44588  
  4 3 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 1h # 67.139465  
  4 4 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 2h # 73.15154  
  4 5 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 3h # 38.977173  
  4 6 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 4h # 49.668587  
  4 7 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 6h # 44.000923  
  4 8 AAB30197 AAB30197 PR:138 39946 CU:050 # TOE # PO:0009005[#] MCP:1000518[7d] EO:0007270 7d MCE:1000119 5mM 24h # 36.469433  
 
AAB30197- beta-glucuronidase
PR:138-OsETHE1 (LOC_Os01g47690)
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
d-Days
mM-millimolar
d-Days
h-Hours
m-Minutes
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007270-continuous dark (no light) regimen
MCE:1000119-calcium chloride regimen (CaCl2)
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  24410953 8.A,B F GUS activity assay : Fluorometry OsETHE1- LOC_Os01g47690. OsETHE1 promoter activity was stimulated by Ca(II) and required light for induction.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os01g47690 GO:0051592 # # # # #            
 
LOC_Os01g47690-metallo-beta-lactamase family protein, putative, expressed
GO:0051592-response to calcium ion
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India