Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24420860 4.A F Gene expression analysis (transcription) : Quantitative RT-PCR NRRB-GenBank accession NM_001071838-LOC_Os10g40100. The 3-leaf stage seedlings spray-treated with 0.1 % ethanol solution was chosen as control. * and ** Indicate a significant (t test, P<0.05) and an extremely significant (t test,P<0.01) differences of the average relative expression level between mock and the treatment with defense-signal compounds,respectively.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] # # 1
grp_1_1_2
grp_1_1_1
 
  1 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] # # 1
grp_1_2_1
 
  1 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] # # 1
grp_1_3_1
 
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000090 0.1% 30m # 1.2585973
grp_2_1_1
 
  2 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] EO:0007187 2mM 30m # 0.20582479  
  2 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000056 2mM 30m # 1.3245238  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
mM-millimolar
m-Minutes
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
EO:0007187-salicylic acid regimen
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
MCE:1000090-ethanol
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000090 0.1% 3h # 0.5740597
grp_3_1_1
 
  3 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] EO:0007187 2mM 3h # 0.21516906  
  3 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000056 2mM 3h # 0.23180568  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
mM-millimolar
h-Hours
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
EO:0007187-salicylic acid regimen
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
MCE:1000090-ethanol
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000090 0.1% 6h # 0.59967154
grp_4_1_1
 
  4 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] EO:0007187 2mM 6h # 0.28980508  
  4 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000056 2mM 6h # 0.37174824  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
mM-millimolar
h-Hours
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
EO:0007187-salicylic acid regimen
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
MCE:1000090-ethanol
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000090 0.1% 9h # 0.9273999
grp_5_1_1
 
  5 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] EO:0007187 2mM 9h # 0.28280795  
  5 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000056 2mM 9h # 0.48720086  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
mM-millimolar
h-Hours
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
EO:0007187-salicylic acid regimen
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
MCE:1000090-ethanol
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000090 0.1% 12h # 1.3285538
grp_6_1_1
 
  6 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] EO:0007187 2mM 12h # 0.18602912  
  6 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000056 2mM 12h # 0.6924499  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
mM-millimolar
h-Hours
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
EO:0007187-salicylic acid regimen
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
MCE:1000090-ethanol
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000090 0.1% 24h # 0.7338127
grp_7_1_1
 
  7 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] EO:0007187 2mM 24h # 0.10554739  
  7 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0007106[#] MCE:1000056 2mM 24h # 0.48135513  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
mM-millimolar
h-Hours
PO:0007106-LP.03 three leaves visible
PO:0025034-leaf
EO:0007187-salicylic acid regimen
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
MCE:1000090-ethanol
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  24420860 4.A F Gene expression analysis (transcription) : Quantitative RT-PCR NRRB-GenBank accession NM_001071838-LOC_Os10g40100.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os10g40100 GO:0009751 # # # # #            
  2 LOC_Os10g40100 GO:0009961 # # # # #            
 
LOC_Os10g40100-
GO:0009751-response to salicylic acid stimulus
GO:0009961-response to 1-aminocyclopropane-1-carboxylic acid
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India