Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24420860 5 F Gene expression analysis (transcription) : Quantitative RT-PCR NRRB-GenBank accession NM_001071838-LOC_Os10g40100.Fully expanded leaves at booting stage were inoculated with the pathogen suspension or the sterile water as a control by a pin- pricked method. * and ** indicate a significant (t test, P<0.05) and an extremely significant (t test, P<0.01) differences of the average relative expression level between mock and treatment with Xoc inoculation,respectively.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_1_1_1
 
  1 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 1d # 9.368239
grp_1_2_1
 
  1 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 1d # 4.6079793  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_2_1_1
 
  2 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 2d # 3.0915124
grp_2_2_1
 
  2 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 2d # 3.475462  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_3_1_1
 
  3 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 3d # 4.0263953
grp_3_2_1
 
  3 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 3d # 1.9824498  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_4_1_1
 
  4 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 4d # 3.951558
grp_4_2_1
 
  4 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 4d # 2.9894085  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_5_1_1
 
  5 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 6d # 1.3527117
grp_5_2_1
 
  5 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 6d # 1.3039352  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_6_1_1
 
  6 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 8d # 2.840395
grp_6_2_1
 
  6 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 8d # 1.9022837  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] # # 1
grp_7_1_1
 
  7 2 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] EO:0007198 10d # 5.722332
grp_7_2_1
 
  7 3 LOC_Os10g40100 # # 39947 CU:138 # WT # PO:0025034[#] PO:0001053[#] PO:0007014[#] MCE:1000302 10d # 4.519684  
 
LOC_Os10g40100-
39947-Oryza sativa japonica group
CU:138-cv. Zhonghua 11
WT-Wild Type
d-Days
PO:0001053-3 leaf fully expanded
PO:0007014-booting
PO:0025034-leaf
EO:0007198-water environment
MCE:1000302-Xanthomonas oryzae pv. oryzicola strain RS105
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  24420860 5 F Gene expression analysis (transcription) : Quantitative RT-PCR NRRB-GenBank accession NM_001071838-LOC_Os10g40100.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os10g40100 GO:0009611 # # # # #            
  2 LOC_Os10g40100 GO:0009617 # # # # #            
 
LOC_Os10g40100-
GO:0009611-response to wounding
GO:0009617-response to bacterium
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India