Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24459431 3 F Gene expression analysis (transcription) : Quantitative RT-PCR RAP id(Os03g0745000)-LOC_Os03g53340;RAP id (Os11g0453900)-LOC_Os11g26750;RAP id (Os06g0195800)-LOC_Os06g09560; OsHsfB2c RAP id(Os09g0526600)-LOC_Os09g35790; AWPM-19 RAP id(Os05g0381400)-LOC_Os05g31670; Hsp90 RAP id(Os04g0107900)-LOC_Os04g01740. Rice cultivar was not mentioned for this experiment, in the article.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os03g53340 # # 39947 # # WT # PO:0009005[#] MCP:1000518[3w] # # 11.410658  
  1 2 LOC_Os03g53340 # # 39947 # # WT # PO:0009047[#] PO:0007014[#] # # 13.605016  
  1 3 LOC_Os03g53340 # # 39947 # # WT # PO:0025034[#] PO:0007014[#] # # 13.793103  
  1 4 LOC_Os03g53340 # # 39947 # # WT # PO:0020104[#] PO:0007014[#] # # 9.216301  
  1 5 LOC_Os03g53340 # # 39947 # # WT # PO:0009049[#] PO:0007014[#] # # 11.912226  
  1 6 LOC_Os03g53340 # # 39947 # # WT # PO:0009009[#] PO:0007022[48h] # # 10.9717865  
 
LOC_Os03g53340-
39947-Oryza sativa japonica group
WT-Wild Type
h-Hours
w-Weeks
MCP:1000518-seedling development stage
PO:0007014-booting
PO:0007022-imbibition
PO:0009005-root
PO:0009009-plant embryo
PO:0009047-stem
PO:0009049-inflorescence
PO:0020104-leaf sheath
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os11g26750 # # 39947 # # WT # PO:0009005[#] MCP:1000518[3w] # # 11.53605  
  2 2 LOC_Os11g26750 # # 39947 # # WT # PO:0009047[#] PO:0007014[#] # # 11.84953  
  2 3 LOC_Os11g26750 # # 39947 # # WT # PO:0025034[#] PO:0007014[#] # # 12.978056  
  2 4 LOC_Os11g26750 # # 39947 # # WT # PO:0020104[#] PO:0007014[#] # # 11.473354  
  2 5 LOC_Os11g26750 # # 39947 # # WT # PO:0009049[#] PO:0007014[#] # # 11.974921  
  2 6 LOC_Os11g26750 # # 39947 # # WT # PO:0009009[#] PO:0007022[48h] # # 10.282131  
 
LOC_Os11g26750-
39947-Oryza sativa japonica group
WT-Wild Type
h-Hours
w-Weeks
MCP:1000518-seedling development stage
PO:0007014-booting
PO:0007022-imbibition
PO:0009005-root
PO:0009009-plant embryo
PO:0009047-stem
PO:0009049-inflorescence
PO:0020104-leaf sheath
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os06g09560 # # 39947 # # WT # PO:0009005[#] MCP:1000518[3w] # # 10.47022  
  3 2 LOC_Os06g09560 # # 39947 # # WT # PO:0009047[#] PO:0007014[#] # # 8.840125  
  3 3 LOC_Os06g09560 # # 39947 # # WT # PO:0025034[#] PO:0007014[#] # # 11.097178  
  3 4 LOC_Os06g09560 # # 39947 # # WT # PO:0020104[#] PO:0007014[#] # # 8.77743  
  3 5 LOC_Os06g09560 # # 39947 # # WT # PO:0009049[#] PO:0007014[#] # # 12.037618  
  3 6 LOC_Os06g09560 # # 39947 # # WT # PO:0009009[#] PO:0007022[48h] # # 10.344828  
 
LOC_Os06g09560-
39947-Oryza sativa japonica group
WT-Wild Type
h-Hours
w-Weeks
MCP:1000518-seedling development stage
PO:0007014-booting
PO:0007022-imbibition
PO:0009005-root
PO:0009009-plant embryo
PO:0009047-stem
PO:0009049-inflorescence
PO:0020104-leaf sheath
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os09g35790 # # 39947 # # WT # PO:0009005[#] MCP:1000518[3w] # # 9.278996  
  4 2 LOC_Os09g35790 # # 39947 # # WT # PO:0009047[#] PO:0007014[#] # # 7.8996863  
  4 3 LOC_Os09g35790 # # 39947 # # WT # PO:0025034[#] PO:0007014[#] # # 11.974921  
  4 4 LOC_Os09g35790 # # 39947 # # WT # PO:0020104[#] PO:0007014[#] # # 3.3855798  
  4 5 LOC_Os09g35790 # # 39947 # # WT # PO:0009049[#] PO:0007014[#] # # 7.648903  
  4 6 LOC_Os09g35790 # # 39947 # # WT # PO:0009009[#] PO:0007022[48h] # # 10.15674  
 
LOC_Os09g35790-
39947-Oryza sativa japonica group
WT-Wild Type
h-Hours
w-Weeks
MCP:1000518-seedling development stage
PO:0007014-booting
PO:0007022-imbibition
PO:0009005-root
PO:0009009-plant embryo
PO:0009047-stem
PO:0009049-inflorescence
PO:0020104-leaf sheath
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os05g31670 # # 39947 # # WT # PO:0009005[#] MCP:1000518[3w] # # 12.225705  
  5 2 LOC_Os05g31670 # # 39947 # # WT # PO:0009047[#] PO:0007014[#] # # 8.15047  
  5 3 LOC_Os05g31670 # # 39947 # # WT # PO:0025034[#] PO:0007014[#] # # 18.119122  
  5 4 LOC_Os05g31670 # # 39947 # # WT # PO:0020104[#] PO:0007014[#] # # 11.159875  
  5 5 LOC_Os05g31670 # # 39947 # # WT # PO:0009049[#] PO:0007014[#] # # 6.583072  
  5 6 LOC_Os05g31670 # # 39947 # # WT # PO:0009009[#] PO:0007022[48h] # # 12.7899685  
 
LOC_Os05g31670-
39947-Oryza sativa japonica group
WT-Wild Type
h-Hours
w-Weeks
MCP:1000518-seedling development stage
PO:0007014-booting
PO:0007022-imbibition
PO:0009005-root
PO:0009009-plant embryo
PO:0009047-stem
PO:0009049-inflorescence
PO:0020104-leaf sheath
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os04g01740 # # 39947 # # WT # PO:0009005[#] MCP:1000518[3w] # # 10.282131  
  6 2 LOC_Os04g01740 # # 39947 # # WT # PO:0009047[#] PO:0007014[#] # # 6.081505  
  6 3 LOC_Os04g01740 # # 39947 # # WT # PO:0025034[#] PO:0007014[#] # # 16.551723  
  6 4 LOC_Os04g01740 # # 39947 # # WT # PO:0020104[#] PO:0007014[#] # # 6.8965516  
  6 5 LOC_Os04g01740 # # 39947 # # WT # PO:0009049[#] PO:0007014[#] # # 11.598746  
  6 6 LOC_Os04g01740 # # 39947 # # WT # PO:0009009[#] PO:0007022[48h] # # 10.344828  
 
LOC_Os04g01740-
39947-Oryza sativa japonica group
WT-Wild Type
h-Hours
w-Weeks
MCP:1000518-seedling development stage
PO:0007014-booting
PO:0007022-imbibition
PO:0009005-root
PO:0009009-plant embryo
PO:0009047-stem
PO:0009049-inflorescence
PO:0020104-leaf sheath
PO:0025034-leaf
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India