Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24627964 2 F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) GenBank accession Id for OsLCT1 from Kasalath, BAO56893-AB905363. Statistically significant difference was calculated by t-test, at P < 0.05; P < 0.01 & P < 0.001.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  1 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0006044 3082.642
grp_1_1_1
 
  1 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0006044 2026.0566  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0006044-magnesium concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  2 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0000513 13995.4795
grp_2_1_1
 
  2 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0000513 6458.404  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0000513-potassium concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  3 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0006047 3630.155
grp_3_1_1
 
  3 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0006047 2434.7764  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0006047-calcium concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  4 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0006048 7.805716
grp_4_1_1
 
  4 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0006048 4.8247533  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0006048-manganese concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  5 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0000526 2161.172
grp_5_1_1
 
  5 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0000526 2225.2747  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0000526-sodium concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  6 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0006049 213.08005
grp_6_1_1
 
  6 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0006049 195.11017  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0006049-iron concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  7 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0006052 13.441156
grp_7_1_1
 
  7 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0006052 11.906603  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0006052-copper concentration
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanogram/107 yeast cells  
  8 1 BAO56893 # PR:55 4932 # ycf1_deletion TC # #[#] EO:0007223 20然 75m TO:0006053 183.61292
grp_8_1_1
 
  8 2 BAO56893 BAO56893 PR:55 4932 # ycf1_deletion TOE # #[#] EO:0007223 20然 75m TO:0006053 188.86954  
 
BAO56893-Low affinity cation transporter
PR:55-GAL1 - Galactokinase from yeast
4932-Saccharomyces cerevisiae
TC-Empty vector
TOE-Transgenic overexpression
-
m-Minutes
EO:0007223-cadmium chloride
TO:0006053-zinc concentration
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  24627964 2 F Ion accumulation assay : Inductively Coupled Plasma Mass Spectrometry (ICP-MS) GenBank accession Id for OsLCT1 from Kasalath, BAO56893-AB905363. Expression of Kasalath OsLCT1 significantly reduced cellular accumulation of Mg, K, Ca and Mn when compared with empty vector cells, but did not affect Na, Fe, Cu or Zn accumulation.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 BAO56893 GO:0006813 # # # # #            
  2 BAO56893 GO:0006816 # # # # #            
  3 BAO56893 GO:0006828 # # # # #            
  4 BAO56893 GO:0015693 # # # # #            
 
BAO56893-Low affinity cation transporter
GO:0006813-potassium ion transport
GO:0006816-calcium ion transport
GO:0006828-manganese ion transport
GO:0015693-magnesium ion transport
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India