Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24798203 4.E F Gene expression analysis (transcription) : Quantitative RT-PCR OsABCB14 - LOC_Os04g38570. OsIAA1- LOC_Os01g08320(Back reference- PMID:16200395); OsIAA3-LOC_Os01g13030(Back reference- PMID:16200396); OsIAA9-LOC_Os02g56120(Back reference- PMID:16200397); OsIAA20-LOC_Os06g07040(Back reference- PMID:16200398); OsIAA23-LOC_Os06g39590(Back reference- PMID:16200399); OsSAUR39-LOC_Os09g37330(obtained by Primer BLAST in RGAP).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os01g08320 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[7d] # # 1
grp_1_1_1
 
  1 2 LOC_Os01g08320 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCP:1000518[7d] # # 0.98605454  
  1 3 LOC_Os01g08320 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCP:1000518[7d] # # 0.9853479  
 
LOC_Os01g08320-OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os01g13030 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[7d] # # 1
grp_2_1_1
 
  2 2 LOC_Os01g13030 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCP:1000518[7d] # # 0.38359323  
  2 3 LOC_Os01g13030 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCP:1000518[7d] # # 0.5039206  
 
LOC_Os01g13030-OsIAA3 - Auxin-responsive Aux/IAA gene family member, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os02g56120 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[7d] # # 1
grp_3_1_1
 
  3 2 LOC_Os02g56120 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCP:1000518[7d] # # 0.5092348  
  3 3 LOC_Os02g56120 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCP:1000518[7d] # # 0.53423065  
 
LOC_Os02g56120-OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os06g07040 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[7d] # # 1
grp_4_1_1
 
  4 2 LOC_Os06g07040 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCP:1000518[7d] # # 1.0337204  
  4 3 LOC_Os06g07040 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCP:1000518[7d] # # 0.980814  
 
LOC_Os04g38570-multidrug resistance protein, putative, expressed
LOC_Os06g07040-OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os06g39590 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[7d] # # 1
grp_5_1_1
 
  5 2 LOC_Os06g39590 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCP:1000518[7d] # # 0.76914436  
  5 3 LOC_Os06g39590 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCP:1000518[7d] # # 0.7506992  
 
LOC_Os04g38570-multidrug resistance protein, putative, expressed
LOC_Os06g39590-OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os09g37330 # # 39947 CU:100 # WT # PO:0009006[#] MCP:1000518[7d] # # 1
grp_6_1_1
 
  6 2 LOC_Os09g37330 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCP:1000518[7d] # # 0.35747862  
  6 3 LOC_Os09g37330 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCP:1000518[7d] # # 0.46024418  
 
LOC_Os04g38570-multidrug resistance protein, putative, expressed
LOC_Os09g37330-OsSAUR39 - Auxin-responsive SAUR gene family member, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
d-Days
MCP:1000518-seedling development stage
PO:0009006-shoot system
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India