Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24798203 7.B F Gene expression analysis (transcription) : Quantitative RT-PCR OsABCB14 - LOC_Os04g38570(given in article); OsIRT1-LOC_Os03g46470, OsIRT2-LOC_Os03g46454, OsIRO2-LOC_Os01g72370, OsYSL15-LOC_Os02g43410, OsNAAT1-LOC_Os02g20360, OsNRAMP2-LOC_Os12g39180, OsNAS1-LOC_Os03g19427, OsNAS2-LOC_Os03g19420 (obtained by primer BLAST in RGAP).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os03g46470 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_1_1_1
 
  1 2 LOC_Os03g46470 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 46.065353  
  1 3 LOC_Os03g46470 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_1_3_1
 
  1 4 LOC_Os03g46470 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 7.853466  
  1 5 LOC_Os03g46470 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_1_5_1
 
  1 6 LOC_Os03g46470 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 24.636993  
 
LOC_Os03g46470-metal cation transporter, putative, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os03g46454 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_2_1_1
 
  2 2 LOC_Os03g46454 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 11479.226  
  2 3 LOC_Os03g46454 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_2_3_1
 
  2 4 LOC_Os03g46454 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 2382.799  
  2 5 LOC_Os03g46454 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_2_5_1
 
  2 6 LOC_Os03g46454 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 2858.4846  
 
LOC_Os03g46454-metal cation transporter, putative, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os01g72370 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_3_1_1
 
  3 2 LOC_Os01g72370 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 17332.268  
  3 3 LOC_Os01g72370 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_3_3_1
 
  3 4 LOC_Os01g72370 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 6073.3115  
  3 5 LOC_Os01g72370 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_3_5_1
 
  3 6 LOC_Os01g72370 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 10776.551  
 
LOC_Os01g72370-helix-loop-helix DNA-binding domain containing protein, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os02g43410 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_4_1_1
 
  4 2 LOC_Os02g43410 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 25453.502  
  4 3 LOC_Os02g43410 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_4_3_1
 
  4 4 LOC_Os02g43410 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 9823.278  
  4 5 LOC_Os02g43410 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_4_5_1
 
  4 6 LOC_Os02g43410 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 13759.817  
 
LOC_Os02g43410-transposon protein, putative, unclassified, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os02g20360 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_5_1_1
 
  5 2 LOC_Os02g20360 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 492.25656  
  5 3 LOC_Os02g20360 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_5_3_1
 
  5 4 LOC_Os02g20360 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 168.92326  
  5 5 LOC_Os02g20360 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_5_5_1
 
  5 6 LOC_Os02g20360 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 113.7913  
 
LOC_Os02g20360-tyrosine aminotransferase, putative, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os12g39180 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_6_1_1
 
  6 2 LOC_Os12g39180 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 4.032688  
  6 3 LOC_Os12g39180 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_6_3_1
 
  6 4 LOC_Os12g39180 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 1.1662382  
  6 5 LOC_Os12g39180 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_6_5_1
 
  6 6 LOC_Os12g39180 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 2.9372146  
 
LOC_Os04g38570-multidrug resistance protein, putative, expressed
LOC_Os12g39180-natural resistance-associated macrophage protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os03g19427 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_7_1_1
 
  7 2 LOC_Os03g19427 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 7260.3657  
  7 3 LOC_Os03g19427 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_7_3_1
 
  7 4 LOC_Os03g19427 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 2105.0034  
  7 5 LOC_Os03g19427 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_7_5_1
 
  7 6 LOC_Os03g19427 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 2274.0999  
 
LOC_Os03g19427-nicotianamine synthase, putative, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  8 1 LOC_Os03g19420 # # 39947 CU:100 # WT # PO:0009006[#] # # 1
grp_8_1_1
 
  8 2 LOC_Os03g19420 # # 39947 CU:100 # WT # PO:0009006[#] MCE:1000143 # 8151.2397  
  8 3 LOC_Os03g19420 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] # # 1
grp_8_3_1
 
  8 4 LOC_Os03g19420 LOC_Os04g38570 # 39947 CU:100 # TOS 1 PO:0009006[#] MCE:1000143 # 5377.8687  
  8 5 LOC_Os03g19420 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] # # 1
grp_8_5_1
 
  8 6 LOC_Os03g19420 LOC_Os04g38570 # 39947 CU:100 # TOS 2 PO:0009006[#] MCE:1000143 # 6318.757  
 
LOC_Os03g19420-nicotianamine synthase, putative, expressed
LOC_Os04g38570-multidrug resistance protein, putative, expressed
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
TOS-TOS17 mutant
WT-Wild Type
PO:0009006-shoot system
MCE:1000143-iron deficiency treatment
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India