Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24805883 4 F Gene expression analysis (transcription) : Northern Analysis OsCAF1A-LOC_Os08g34170, OsCAF1B-LOC_Os04g58810, OsCAF1G-LOC_Os09g24990.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0009005[#] MCP:1000518[21d] # # 0  
  1 2 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0009006[#] MCP:1000518[21d] # # 1  
  1 3 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0025034[#] MCP:1000521[3m] # # 3  
  1 4 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0020104[#] MCP:1000521[3m] # # 2  
  1 5 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0025034[#] PO:0001054[#] MCP:1000521[3m] # # 3  
  1 6 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0020040[#] MCP:1000521[3m] # # 3  
  1 7 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0025142[#] MCP:1000521[3m] # # 3  
  1 8 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0005004[#] MCP:1000521[3m] # # 1  
  1 9 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0020122[#] MCP:1000521[3m] # # 2  
  1 10 LOC_Os08g34170 # # 39947 CU:122 # WT # PO:0009051[#] MCP:1000521[3m] # # 3  
 
LOC_Os08g34170-CAF1 family ribonuclease containing protein, putative, expressed
39947-Oryza sativa japonica group
CU:122-cv. Tainung 67, cv. TNG67, cv. Tainong 67
WT-Wild Type
d-Days
m-Months
MCP:1000518-seedling development stage
MCP:1000521-mature plant stage
PO:0001054-4 leaf senescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009006-shoot system
PO:0009051-spikelet
PO:0020040-leaf base
PO:0020104-leaf sheath
PO:0020122-inflorescence axis
PO:0025034-leaf
PO:0025142-leaf tip
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0009005[#] MCP:1000518[21d] # # 1  
  2 2 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0009006[#] MCP:1000518[21d] # # 0  
  2 3 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0025034[#] MCP:1000521[3m] # # 1  
  2 4 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0020104[#] MCP:1000521[3m] # # 3  
  2 5 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0025034[#] PO:0001054[#] MCP:1000521[3m] # # 1  
  2 6 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0020040[#] MCP:1000521[3m] # # 1  
  2 7 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0025142[#] MCP:1000521[3m] # # 1  
  2 8 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0005004[#] MCP:1000521[3m] # # 1  
  2 9 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0020122[#] MCP:1000521[3m] # # 1  
  2 10 LOC_Os04g58810 # # 39947 CU:122 # WT # PO:0009051[#] MCP:1000521[3m] # # 2  
 
LOC_Os04g58810-CAF1 family ribonuclease containing protein, putative, expressed
39947-Oryza sativa japonica group
CU:122-cv. Tainung 67, cv. TNG67, cv. Tainong 67
WT-Wild Type
d-Days
m-Months
MCP:1000518-seedling development stage
MCP:1000521-mature plant stage
PO:0001054-4 leaf senescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009006-shoot system
PO:0009051-spikelet
PO:0020040-leaf base
PO:0020104-leaf sheath
PO:0020122-inflorescence axis
PO:0025034-leaf
PO:0025142-leaf tip
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0009005[#] MCP:1000518[21d] # # 0  
  3 2 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0009006[#] MCP:1000518[21d] # # 1  
  3 3 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0025034[#] MCP:1000521[3m] # # 3  
  3 4 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0020104[#] MCP:1000521[3m] # # 2  
  3 5 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0025034[#] PO:0001054[#] MCP:1000521[3m] # # 3  
  3 6 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0020040[#] MCP:1000521[3m] # # 3  
  3 7 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0025142[#] MCP:1000521[3m] # # 3  
  3 8 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0005004[#] MCP:1000521[3m] # # 1  
  3 9 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0020122[#] MCP:1000521[3m] # # 2  
  3 10 LOC_Os09g24990 # # 39947 CU:122 # WT # PO:0009051[#] MCP:1000521[3m] # # 3  
 
LOC_Os09g24990-CAF1 family ribonuclease containing protein, putative, expressed
39947-Oryza sativa japonica group
CU:122-cv. Tainung 67, cv. TNG67, cv. Tainong 67
WT-Wild Type
d-Days
m-Months
MCP:1000518-seedling development stage
MCP:1000521-mature plant stage
PO:0001054-4 leaf senescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009006-shoot system
PO:0009051-spikelet
PO:0020040-leaf base
PO:0020104-leaf sheath
PO:0020122-inflorescence axis
PO:0025034-leaf
PO:0025142-leaf tip
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India