Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  24976122 5.A.ix F Gene expression analysis (transcription) : Quantitative RT-PCR OsGA20ox1-LOC_Os03g63970; OsGA20ox3-LOC_Os07g07420;OsGA2ox5-LOC_Os07g01340;OsGA2ox6-LOC_Os04g44150(supplement).Fig 5.A has been split into 9 parts. Seeds were taken after 0 to 72 h of imbibition.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[#] # # 0.10134
grp_1_1_1
 
  1 2 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[12h] # 12h # 0.09719  
  1 3 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[24h] # 24h # 0.29589  
  1 4 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[36h] # 36h # 0.18354  
  1 5 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[48h] # 48h # 0.42054  
  1 6 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[60h] # 60h # 0.09861  
  1 7 LOC_Os03g63970 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[72h] # 72h # 0.05068  
 
LOC_Os03g63970-gibberellin 20 oxidase 1, putative, expressed
39946-Oryza sativa (indica group)
CU:094-cv. Nagina 22
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[#] # # 0.00272
grp_2_1_1
 
  2 2 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[12h] # 12h # 0.05339  
  2 3 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[24h] # 24h # 0.00271  
  2 4 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[36h] # 36h # 0.07945  
  2 5 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[48h] # 48h # 0.00545  
  2 6 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[60h] # 60h # 0.00961  
  2 7 LOC_Os07g07420 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[72h] # 72h # 0.00687  
 
LOC_Os07g07420-gibberellin 20 oxidase 1-B, putative, expressed
39946-Oryza sativa (indica group)
CU:094-cv. Nagina 22
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[#] # # 0.02464
grp_3_1_1
 
  3 2 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[12h] # 12h # 0.02873  
  3 3 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[24h] # 24h # 0.12187  
  3 4 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[36h] # 36h # 0.07805  
  3 5 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[48h] # 48h # 0.17263  
  3 6 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[60h] # 60h # 0.04248  
  3 7 LOC_Os07g01340 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[72h] # 72h # 0.02324  
 
LOC_Os07g01340-gibberellin 2-beta-dioxygenase 7, putative, expressed
39946-Oryza sativa (indica group)
CU:094-cv. Nagina 22
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[#] # # 0.00409
grp_4_1_1
 
  4 2 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[12h] # 12h # 0.01096  
  4 3 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[24h] # 24h # 0.08768  
  4 4 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[36h] # 36h # 0.01915  
  4 5 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[48h] # 48h # 0.02602  
  4 6 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[60h] # 60h # 0.00687  
  4 7 LOC_Os04g44150 # # 39946 CU:094 # WT # PO:0009010[#] PO:0007022[72h] # 72h # 0.00824  
 
LOC_Os04g44150-gibberellin 2-beta-dioxygenase 7, putative, expressed
39946-Oryza sativa (indica group)
CU:094-cv. Nagina 22
WT-Wild Type
h-Hours
h-Hours
PO:0007022-imbibition
PO:0009010-seed
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India