Figure Details Page
Regulation details
PubMed Id Figure
 Type Experimental method Comment  
  25061741 4.B.iii F Gene expression analysis (transcription) : Quantitative RT-PCR Seedlings of all 3 cultivars Zonghua11 , Nipponbare (japonica), and 93-11 (indica) were subjected to salt and osmotic stress. PEG6000 was used. Statistically significant difference is considered as P<0.01.Fig 4.B has been split into 3 parts.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype		 Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os07g08500 # # 4530 # # WT # PO:0009005[#] MCP:1000518[2w] # 12h # 1
grp_1_1_1
 
  1 2 LOC_Os07g08500 # # 4530 # # WT # PO:0009005[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.814  
  1 3 LOC_Os07g08500 # # 4530 # # WT # PO:0009005[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os07g08500-C-5 cytosine-specific DNA methylase, putative, expressed
4530-Oryza Sativa
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0009005-root
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
  
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype		 Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os07g08500 # # 4530 # # WT # PO:0009006[#] MCP:1000518[2w] # 12h # 1.12093
grp_2_1_1
 
  2 2 LOC_Os07g08500 # # 4530 # # WT # PO:0009006[#] MCP:1000518[2w] EO:0007048 150mM 12h # 1.29024  
  2 3 LOC_Os07g08500 # # 4530 # # WT # PO:0009006[#] MCP:1000518[2w] MCE:1000016 20% 12h # 1.67712  
 
LOC_Os07g08500-C-5 cytosine-specific DNA methylase, putative, expressed
4530-Oryza Sativa
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0009006-shoot system
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
  
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  25061741 4.B.iii F Gene expression analysis (transcription) : Quantitative RT-PCR  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os07g08500 GO:0006970 # # # # #            
 
LOC_Os07g08500-C-5 cytosine-specific DNA methylase, putative, expressed
GO:0006970-response to osmotic stress
  

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India