Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25061741 6.B F Gene expression analysis (transcription) : Quantitative RT-PCR  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os03g12570 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.40595
grp_1_1_1
 
  1 2 LOC_Os03g12570 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0  
  1 3 LOC_Os03g12570 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os03g12570-expressed protein
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os05g13790 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.22553
grp_2_1_1
 
  2 2 LOC_Os05g13790 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.30846  
  2 3 LOC_Os05g13790 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0.00729  
 
LOC_Os05g13790-expressed protein
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os10g01570 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 0.45599
grp_3_1_1
 
  3 2 LOC_Os10g01570 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.01089  
  3 3 LOC_Os10g01570 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os10g01570-C-5 cytosine-specific DNA methylase, putative, expressed
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os01g42630 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.23959
grp_4_1_1
 
  4 2 LOC_Os01g42630 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.01792  
  4 3 LOC_Os01g42630 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os01g42630-C-5 cytosine-specific DNA methylase, putative, expressed
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os03g58400 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.1663
grp_5_1_1
 
  5 2 LOC_Os03g58400 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.08854  
  5 3 LOC_Os03g58400 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os03g58400-C-5 cytosine-specific DNA methylase, putative, expressed
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os07g08500 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.24697
grp_6_1_1
 
  6 2 LOC_Os07g08500 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.00856  
  6 3 LOC_Os07g08500 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os07g08500-C-5 cytosine-specific DNA methylase, putative, expressed
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os11g01810 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.14019
grp_7_1_1
 
  7 2 LOC_Os11g01810 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.09592  
  7 3 LOC_Os11g01810 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os11g01810-DNA methyltransferase protein, putative
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  8 1 LOC_Os12g01800 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.29451
grp_8_1_1
 
  8 2 LOC_Os12g01800 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.08287  
  8 3 LOC_Os12g01800 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os12g01800-DNA cytosine methyltransferase Zmet3, putative
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  9 1 LOC_Os03g02010 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.30153
grp_9_1_1
 
  9 2 LOC_Os03g02010 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.14011  
  9 3 LOC_Os03g02010 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os03g02010-DNA methyltransferase protein, putative, expressed
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  10 1 LOC_Os05g04330 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] # 12h # 1.10774
grp_10_1_1
 
  10 2 LOC_Os05g04330 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] EO:0007048 150mM 12h # 0.0099  
  10 3 LOC_Os05g04330 # # 39946 CU:038 # WT # PO:0008037[#] MCP:1000518[2w] MCE:1000016 20% 12h # 0  
 
LOC_Os05g04330-DNA methyltransferase protein, putative, expressed
39946-Oryza sativa (indica group)
CU:038-cv. 93-11
WT-Wild Type
w-Weeks
mM-millimolar
h-Hours
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
MCE:1000016-polyethylene glycol (PEG) treatment
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India