Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25150410 4.A F Morphological observation GenBank id for OsBADH1(LOC_Os04g39020 )-AK103582. Statistically significant difference was calculated at P<0.05, (represented in the figure, by * ).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  1 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0008037[#] MCP:1000518[3d] # 6d TO:0000227 5.36061
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0008037[#] MCP:1000518[3d] # 6d TO:0000227 5.97982
grp_1_2_1
 
  1 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0008037[#] MCP:1000518[3d] # 6d TO:0000227 5.36061
grp_1_3_1
 
  1 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0008037[#] MCP:1000518[3d] # 6d TO:0000227 5.41578
grp_1_4_1
 
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
d-Days
MCP:1000518-seedling development stage
PO:0008037-seedling
TO:0000227-root length
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  2 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0008037[#] MCP:1000518[3d] EO:0007048 50mM 6d TO:0000227 5.56361
grp_2_1_1
 
  2 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0008037[#] MCP:1000518[3d] EO:0007048 50mM 6d TO:0000227 4.12408  
  2 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0008037[#] MCP:1000518[3d] EO:0007048 50mM 6d TO:0000227 4.19745  
  2 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0008037[#] MCP:1000518[3d] EO:0007048 50mM 6d TO:0000227 4.23456  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
mM-millimolar
d-Days
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000227-root length
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  3 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0008037[#] MCP:1000518[3d] EO:0007048 100mM 6d TO:0000227 5.16563
grp_3_1_1
 
  3 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0008037[#] MCP:1000518[3d] EO:0007048 100mM 6d TO:0000227 3.83541  
  3 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0008037[#] MCP:1000518[3d] EO:0007048 100mM 6d TO:0000227 4.00006  
  3 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0008037[#] MCP:1000518[3d] EO:0007048 100mM 6d TO:0000227 4.07357  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
mM-millimolar
d-Days
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007048-sodium chloride regimen
TO:0000227-root length
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  4 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0008037[#] MCP:1000518[3d] MCE:1000044 200mM 6d TO:0000227 4.877
grp_4_1_1
 
  4 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0008037[#] MCP:1000518[3d] MCE:1000044 200mM 6d TO:0000227 4.71352  
  4 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0008037[#] MCP:1000518[3d] MCE:1000044 200mM 6d TO:0000227 4.8781  
  4 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0008037[#] MCP:1000518[3d] MCE:1000044 200mM 6d TO:0000227 4.84226  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
mM-millimolar
d-Days
MCP:1000518-seedling development stage
PO:0008037-seedling
MCE:1000044-mannitol
TO:0000227-root length
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  5 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0008037[#] MCP:1000518[3d] MCE:1000044 300mM 6d TO:0000227 2.43738
grp_5_1_1
 
  5 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0008037[#] MCP:1000518[3d] MCE:1000044 300mM 6d TO:0000227 1.47185  
  5 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0008037[#] MCP:1000518[3d] MCE:1000044 300mM 6d TO:0000227 1.5999  
  5 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0008037[#] MCP:1000518[3d] MCE:1000044 300mM 6d TO:0000227 1.43639  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
mM-millimolar
d-Days
MCP:1000518-seedling development stage
PO:0008037-seedling
MCE:1000044-mannitol
TO:0000227-root length
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  6 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0008037[#] MCP:1000518[3d] EO:0007174 6d 4°C TO:0000227 2.75031
grp_6_1_1
 
  6 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0008037[#] MCP:1000518[3d] EO:0007174 6d 4°C TO:0000227 1.63881  
  6 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0008037[#] MCP:1000518[3d] EO:0007174 6d 4°C TO:0000227 1.78526  
  6 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0008037[#] MCP:1000518[3d] EO:0007174 6d 4°C TO:0000227 1.80408  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
d-Days
MCP:1000518-seedling development stage
PO:0008037-seedling
EO:0007174-cold temperature regimen
TO:0000227-root length
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  25150410 4.A F Morphological observation GenBank id for OsBADH1(LOC_Os04g39020 )-AK103582.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os04g39020 GO:0009409 # # # # #            
  2 LOC_Os04g39020 GO:0009651 # # # # #            
  3 LOC_Os04g39020 GO:0010555 # # # # #            
 
LOC_Os04g39020-
GO:0009409-response to cold
GO:0009651-response to salt stress
GO:0010555-response to mannitol stimulus
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India