Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25150410 7.A F Hydrogen peroxide assay : DAB staining Fig 6.A,B,C has been included in Fig 7.A .GenBank id for OsBADH1(LOC_Os04g39020 )-AK103582. Statistically significant difference was calculated at P<0.05, (represented in the figure, by * ).  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanomol/gram fresh weight  
  1 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0025034[#] MCP:1000518[46d] # 15d TO:0000605 4.23823
grp_1_1_1
grp_1_1_2
 
  1 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0025034[#] MCP:1000518[46d] # 15d TO:0000605 4.98615
grp_1_2_1
 
  1 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0025034[#] MCP:1000518[46d] # 15d TO:0000605 5.12465
grp_1_3_1
 
  1 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0025034[#] MCP:1000518[46d] # 15d TO:0000605 5.26316
grp_1_4_1
 
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
d-Days
MCP:1000518-seedling development stage
PO:0025034-leaf
TO:0000605-hydrogen peroxide content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanomol/gram fresh weight  
  2 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0025034[#] MCP:1000518[46d] EO:0007048 100mM 15d TO:0000605 4.90305
grp_2_1_1
 
  2 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0025034[#] MCP:1000518[46d] EO:0007048 100mM 15d TO:0000605 6.28809  
  2 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0025034[#] MCP:1000518[46d] EO:0007048 100mM 15d TO:0000605 5.78947  
  2 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0025034[#] MCP:1000518[46d] EO:0007048 100mM 15d TO:0000605 6.12188  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
mM-millimolar
d-Days
MCP:1000518-seedling development stage
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0000605-hydrogen peroxide content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanomol/gram fresh weight  
  3 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0025034[#] MCP:1000518[46d] EO:0007404 15d TO:0000605 5.01385
grp_3_1_1
 
  3 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0025034[#] MCP:1000518[46d] EO:0007404 15d TO:0000605 8.53186  
  3 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0025034[#] MCP:1000518[46d] EO:0007404 15d TO:0000605 9.41828  
  3 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0025034[#] MCP:1000518[46d] EO:0007404 15d TO:0000605 8.80886  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
d-Days
MCP:1000518-seedling development stage
PO:0025034-leaf
EO:0007404-drought environment
TO:0000605-hydrogen peroxide content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. nanomol/gram fresh weight  
  4 1 LOC_Os04g39020 # # 39947 CU:100 # SNT # PO:0025034[#] MCP:1000518[46d] EO:0007174 15d 4°C TO:0000605 5.45706
grp_4_1_1
 
  4 2 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 1 PO:0025034[#] MCP:1000518[46d] EO:0007174 15d 4°C TO:0000605 6.84211  
  4 3 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 2 PO:0025034[#] MCP:1000518[46d] EO:0007174 15d 4°C TO:0000605 6.39889  
  4 4 LOC_Os04g39020 LOC_Os04g39020 PR:17 39947 CU:100 # TRI 3 PO:0025034[#] MCP:1000518[46d] EO:0007174 15d 4°C TO:0000605 6.8144  
 
LOC_Os04g39020-
PR:17-35s
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
SNT-Seggregating Non Transgenic
TRI-Transgenic RNAi
d-Days
d-Days
MCP:1000518-seedling development stage
PO:0025034-leaf
EO:0007174-cold temperature regimen
TO:0000605-hydrogen peroxide content
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  25150410 7.A F Hydrogen peroxide assay : DAB staining GenBank id for OsBADH1(LOC_Os04g39020 )-AK103582.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os04g39020 GO:0009409 # # # # #            
  2 LOC_Os04g39020 GO:0009414 # # # # #            
  3 LOC_Os04g39020 GO:0009651 # # # # #            
 
LOC_Os04g39020-
GO:0009409-response to cold
GO:0009414-response to water deprivation
GO:0009651-response to salt stress
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India