Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25184028 1.A F Hormone accumulation assay : Enzyme-linked immunosorbent assay (ELISA) GenBank id for OsSUV3(LOC_Os03g53500 )-GQ982584. Statistically significant difference was calculated at P<0.05,P<0.01and P < 0.001.Endogenous content (μg/g fw) of GA3, in OsSUV3 transgenic rice lines (L1, L2 and L3) of T1 generation under 200 mM NaCl.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  1 1 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0025034[#] EO:0007048 200mM 24h TO:0002675 1.5
grp_1_1_1
 
  1 2 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0009047[#] EO:0007048 200mM 24h TO:0002675 1.09249
grp_1_2_1
 
  1 3 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0009005[#] EO:0007048 200mM 24h TO:0002675 0.76879
grp_1_3_1
 
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
WT-Wild Type
mM-millimolar
h-Hours
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0002675-gibberellic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  2 1 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0025034[#] EO:0007048 200mM 24h TO:0002675 1.41619
grp_2_1_1
 
  2 2 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0009047[#] EO:0007048 200mM 24h TO:0002675 1.13295
grp_2_2_1
 
  2 3 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0009005[#] EO:0007048 200mM 24h TO:0002675 0.74855
grp_2_3_1
 
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TC-Empty vector
mM-millimolar
h-Hours
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0002675-gibberellic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  3 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # As # PO:0025034[#] EO:0007048 200mM 24h TO:0002675 1.33526  
  3 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # As # PO:0009047[#] EO:0007048 200mM 24h TO:0002675 1.15318  
  3 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # As # PO:0009005[#] EO:0007048 200mM 24h TO:0002675 0.76879  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
As-Antisense line
mM-millimolar
h-Hours
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0002675-gibberellic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  4 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0025034[#] EO:0007048 200mM 24h TO:0002675 3.05491  
  4 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0009047[#] EO:0007048 200mM 24h TO:0002675 2.77168  
  4 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0009005[#] EO:0007048 200mM 24h TO:0002675 1.96243  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
mM-millimolar
h-Hours
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0002675-gibberellic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  5 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0025034[#] EO:0007048 200mM 24h TO:0002675 3.07514  
  5 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0009047[#] EO:0007048 200mM 24h TO:0002675 2.73121  
  5 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0009005[#] EO:0007048 200mM 24h TO:0002675 2.04335  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
mM-millimolar
h-Hours
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0002675-gibberellic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  6 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0025034[#] EO:0007048 200mM 24h TO:0002675 3.03468  
  6 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0009047[#] EO:0007048 200mM 24h TO:0002675 2.73121  
  6 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0009005[#] EO:0007048 200mM 24h TO:0002675 2.02312  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
mM-millimolar
h-Hours
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0002675-gibberellic acid content
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  25184028 1.A F Hormone accumulation assay : Enzyme-linked immunosorbent assay (ELISA) GenBank id for OsSUV3(LOC_Os03g53500 )-GQ982584.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os03g53500 GO:0009651 # # # # #            
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
GO:0009651-response to salt stress
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India