Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25184028 1.C F Hormone accumulation assay : Enzyme-linked immunosorbent assay (ELISA) GenBank id for OsSUV3(LOC_Os03g53500 )-GQ982584.Statistically significant difference was calculated at P<0.05,P<0.01and P < 0.001.Endogenous content (μg/g fw) of IAA in OsSUV3 transgenic rice lines (L1, L2 and L3) of T1 generation under 200 mM NaCl.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  1 1 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0025034[#] EO:0007048 200mM TO:0020106 1.56642
grp_1_1_1
 
  1 2 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0009047[#] EO:0007048 200mM TO:0020106 1.48431
grp_1_2_1
 
  1 3 LOC_Os03g53500 # # 39946 CU:050 # WT # PO:0009005[#] EO:0007048 200mM TO:0020106 1.51031
grp_1_3_1
 
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
WT-Wild Type
mM-millimolar
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0020106-Indole-3-acetic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  2 1 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0025034[#] EO:0007048 200mM TO:0020106 1.45373
grp_2_1_1
 
  2 2 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0009047[#] EO:0007048 200mM TO:0020106 1.37185
grp_2_2_1
 
  2 3 LOC_Os03g53500 # # 39946 CU:050 # TC # PO:0009005[#] EO:0007048 200mM TO:0020106 1.3975
grp_2_3_1
 
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TC-Empty vector
mM-millimolar
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0020106-Indole-3-acetic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  3 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # As # PO:0025034[#] EO:0007048 200mM TO:0020106 1.42201  
  3 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # As # PO:0009047[#] EO:0007048 200mM TO:0020106 1.34001  
  3 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # As # PO:0009005[#] EO:0007048 200mM TO:0020106 1.39304  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
As-Antisense line
mM-millimolar
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0020106-Indole-3-acetic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  4 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0025034[#] EO:0007048 200mM TO:0020106 3.03928  
  4 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0009047[#] EO:0007048 200mM TO:0020106 2.57891  
  4 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 1 PO:0009005[#] EO:0007048 200mM TO:0020106 1.7129  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
mM-millimolar
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0020106-Indole-3-acetic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  5 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0025034[#] EO:0007048 200mM TO:0020106 3.00756  
  5 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0009047[#] EO:0007048 200mM TO:0020106 2.70923  
  5 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 2 PO:0009005[#] EO:0007048 200mM TO:0020106 1.60009  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
mM-millimolar
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0020106-Indole-3-acetic acid content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Micrograms/gram fresh weight  
  6 1 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0025034[#] EO:0007048 200mM TO:0020106 3.05715  
  6 2 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0009047[#] EO:0007048 200mM TO:0020106 2.6506  
  6 3 LOC_Os03g53500 LOC_Os03g53500 PR:17 39946 CU:050 # TOE 3 PO:0009005[#] EO:0007048 200mM TO:0020106 1.64979  
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
PR:17-35s
39946-Oryza sativa (indica group)
CU:050-cv. IR64, cv. Indica-IR64
TOE-Transgenic overexpression
mM-millimolar
PO:0009005-root
PO:0009047-stem
PO:0025034-leaf
EO:0007048-sodium chloride regimen
TO:0020106-Indole-3-acetic acid content
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  25184028 1.C F Hormone accumulation assay : Enzyme-linked immunosorbent assay (ELISA) GenBank id for OsSUV3(LOC_Os03g53500 )-GQ982584.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os03g53500 GO:0009651 # # # # #            
 
LOC_Os03g53500-helicase conserved C-terminal domain containing protein, expressed
GO:0009651-response to salt stress
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India