Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25522878 4.A F Gene expression analysis (transcription) : Quantitative RT-PCR OsCSLD1-LOC_Os10g42750; OsCSLD2-LOC_Os06g02180; OsCSLD3-LOC_Os08g25710; OsCSLD4-LOC_Os12g36890; OsCSLD5-LOC_Os06g22980.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os10g42750 # # 39947 CU:210 # WT # PO:0025034[#] # # 1
grp_1_1_1
 
  1 2 LOC_Os10g42750 # # 39947 CU:210 # WT # PO:0009005[#] # # 0.45129627  
  1 3 LOC_Os10g42750 # # 39947 CU:210 # WT # PO:0005004[#] # # 0.00511971  
  1 4 LOC_Os10g42750 # # 39947 CU:210 # WT # PO:0009047[#] # # 0.00511971  
  1 5 LOC_Os10g42750 # # 39947 CU:210 # WT # PO:0009049[#] MCP:1000520[#] # # 0.00511971  
 
LOC_Os10g42750-CSLD1 - cellulose synthase-like family D, expressed
39947-Oryza sativa japonica group
CU:210-Suyunuo
WT-Wild Type
MCP:1000520-young inflorescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009047-stem
PO:0009049-inflorescence
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os06g02180 # # 39947 CU:210 # WT # PO:0025034[#] # # 1
grp_2_1_1
 
  2 2 LOC_Os06g02180 # # 39947 CU:210 # WT # PO:0009005[#] # # 0.3398386  
  2 3 LOC_Os06g02180 # # 39947 CU:210 # WT # PO:0005004[#] # # 0.28760365  
  2 4 LOC_Os06g02180 # # 39947 CU:210 # WT # PO:0009047[#] # # 0.13456558  
  2 5 LOC_Os06g02180 # # 39947 CU:210 # WT # PO:0009049[#] MCP:1000520[#] # # 0.18334126  
 
LOC_Os06g02180-CSLD2 - cellulose synthase-like family D, expressed
39947-Oryza sativa japonica group
CU:210-Suyunuo
WT-Wild Type
MCP:1000520-young inflorescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009047-stem
PO:0009049-inflorescence
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os08g25710 # # 39947 CU:210 # WT # PO:0025034[#] # # 1
grp_3_1_1
 
  3 2 LOC_Os08g25710 # # 39947 CU:210 # WT # PO:0009005[#] # # 0.12743948  
  3 3 LOC_Os08g25710 # # 39947 CU:210 # WT # PO:0005004[#] # # 0.27757177  
  3 4 LOC_Os08g25710 # # 39947 CU:210 # WT # PO:0009047[#] # # 0.07402836  
  3 5 LOC_Os08g25710 # # 39947 CU:210 # WT # PO:0009049[#] MCP:1000520[#] # # 5.476023  
 
LOC_Os08g25710-CSLD3 - cellulose synthase-like family D, expressed
39947-Oryza sativa japonica group
CU:210-Suyunuo
WT-Wild Type
MCP:1000520-young inflorescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009047-stem
PO:0009049-inflorescence
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os12g36890 # # 39947 CU:210 # WT # PO:0025034[#] # # 1
grp_4_1_1
 
  4 2 LOC_Os12g36890 # # 39947 CU:210 # WT # PO:0009005[#] # # 18.652794  
  4 3 LOC_Os12g36890 # # 39947 CU:210 # WT # PO:0005004[#] # # 1.1257154  
  4 4 LOC_Os12g36890 # # 39947 CU:210 # WT # PO:0009047[#] # # 0.66992205  
  4 5 LOC_Os12g36890 # # 39947 CU:210 # WT # PO:0009049[#] MCP:1000520[#] # # 0.66812325  
 
LOC_Os12g36890-CSLD4 - cellulose synthase-like family D, expressed
39947-Oryza sativa japonica group
CU:210-Suyunuo
WT-Wild Type
MCP:1000520-young inflorescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009047-stem
PO:0009049-inflorescence
PO:0025034-leaf
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os06g22980 # # 39947 CU:210 # WT # PO:0025034[#] # # 1
grp_5_1_1
 
  5 2 LOC_Os06g22980 # # 39947 CU:210 # WT # PO:0009005[#] # # 0.05624772  
  5 3 LOC_Os06g22980 # # 39947 CU:210 # WT # PO:0005004[#] # # 0.05479482  
  5 4 LOC_Os06g22980 # # 39947 CU:210 # WT # PO:0009047[#] # # 0.05341111  
  5 5 LOC_Os06g22980 # # 39947 CU:210 # WT # PO:0009049[#] MCP:1000520[#] # # 2.172836  
 
LOC_Os06g22980-CSLD5 - cellulose synthase-like family D, expressed
39947-Oryza sativa japonica group
CU:210-Suyunuo
WT-Wild Type
MCP:1000520-young inflorescence stage
PO:0005004-shoot node
PO:0009005-root
PO:0009047-stem
PO:0009049-inflorescence
PO:0025034-leaf
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India