Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  25951042 5.C,D F Seed germination assay OsHXK7-LOC_Os05g09500;Ramy3D-LOC_Os08g36910. Statistically significant difference was calculated at P<0.01 (represented in the figure ** ). Under O2-deficient conditions, the dehulled rice seeds were incubated with 10 mM CaCl2 and kept in the dark for 2 ~ 6 days at 28C .  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Centimeter  
  1 1 LOC_Os05g09500 # # 39947 CU:037 # WT # PO:0008037[#] MCP:1000107[6d] EO:0007025 6d MCE:1000119 10mM 6d TO:0001007 3.09181
grp_1_1_1
 
  1 2 LOC_Os05g09500 LOC_Os05g09500 # 39947 CU:037 # TDNA 1 PO:0008037[#] MCP:1000107[6d] EO:0007025 6d MCE:1000119 10mM 6d TO:0001007 0.3968  
  1 3 LOC_Os05g09500 LOC_Os05g09500 # 39947 CU:037 # TDNA 2 PO:0008037[#] MCP:1000107[6d] EO:0007025 6d MCE:1000119 10mM 6d TO:0001007 0.35804  
 
LOC_Os05g09500-
39947-Oryza sativa japonica group
CU:037-Hwayoung
TDNA-TDNA mutant
WT-Wild Type
d-Days
mM-millimolar
d-Days
MCP:1000107-post-germination stage
PO:0008037-seedling
EO:0007025-anaerobic environment
MCE:1000119-calcium chloride regimen (CaCl2)
TO:0001007-coleoptile length
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  25951042 5.C,D F Seed germination assay OsHXK7-LOC_Os05g09500.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os05g09500 GO:0051592 # # # # #            
 
LOC_Os05g09500-
GO:0051592-response to calcium ion
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India