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Searching for LOC_Os01g07120
[AP2 domain containing protein, expressed ] |
with PubMed Id 22078375
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Search entire database for LOC_Os01g07120 |
Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g07120.1 |
282 |
81 |
132 |
PF00847.12 |
AP2 |
2 |
LOC_Os01g07120.2 |
275 |
74 |
125 |
PF00847.12 |
AP2 |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0003677 |
DNA binding |
(RGAP) |
2 |
GO:0005515 |
protein binding |
(RGAP) |
3 |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
(RGAP) |
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Biological process
S. No. |
GO Id |
GO Description |
1 |
GO:0009414 |
response to water deprivation |
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2 |
GO:0009651 |
response to salt stress |
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3 |
GO:0009737 |
response to abscisic acid stimulus |
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4 |
GO:0042538 |
hyperosmotic salinity response |
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5 |
GO:0006950 |
response to stress |
(RGAP) |
6 |
GO:0009628 |
response to abiotic stimulus |
(RGAP) |
7 |
GO:0009058 |
biosynthetic process |
(RGAP) |
8 |
GO:0006139 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
(RGAP) |
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Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005634 |
nucleus |
(RGAP) |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007105 |
abscisic acid regimen |
(+) |
3 |
EO:0007173 |
warm/hot temperature regimen |
(+) |
4 |
EO:0007174 |
cold temperature regimen |
(+) |
5 |
EO:0007383 |
watering regimen |
(+) |
6 |
EO:0007404 |
drought environment |
(+) |
7 |
MCE:1000016 |
polyethylene glycol (PEG) treatment |
(+) |
8 |
MCE:1000285 |
recovery treatment from salt stress |
(+) |
9 |
MCE:1000286 |
recovery treatment from drought stress |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
PO:0007106 |
LP.03 three leaves visible |
(+) |
3 |
PO:0007130 |
B reproductive growth |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Cui Meng; Zhang Wenjiao; Zhang Qian; Xu Zhiqiang; Zhu Zhengge; Duan Faping; Wu Ray; Induced over-expression of the transcription factor OsDREB2A improves drought tolerance in rice. Plant physiology and biochemistry 2011:49
PMID [22078375]
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