Rice gene details
Searching for LOC_Os05g33730 [gibberellin receptor GID1L2, putative, expressed ]
with PubMed Id 20838584

  Search entire database for LOC_Os05g33730
Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os05g33730.1 355 116 330 PF07859.5 Abhydrolase_3
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  3
N22InfloresenceFC
  1
N22 Root FC
  -1
IR64 Flag-leaf FC
  3
IR64InfloresenceFC
  2
IR64 Root FC
  2

Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
2 GO:0016787 hydrolase activity (RGAP)
Biological process
Not found
1 GO:0007165 signal transduction (RGAP)
2 GO:0009719 response to endogenous stimulus (RGAP)
3 GO:0008152 metabolic process (RGAP)
4 GO:0009058 biosynthetic process (RGAP)
5 GO:0005975 carbohydrate metabolic process (RGAP)
6 GO:0009653 anatomical structure morphogenesis (RGAP)
7 GO:0009908 flower development (RGAP)
Cellular component
Not found
1 GO:0005575 cellular_component (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQBK013 days to heading
2 CQAS60 seed number
3 CQAS61 seed set percent
4 CQAS64 seed number
5 CQAS62 1000-seed weight
6 DQC9 penetrated root number
7 AQEN004 blast disease resistance
8 CQAW17 root number
9 AQC016 penetrated to total root ratio
10 AQFP018 culm strength
11 AQBK016 days to heading
12 CQAS56 panicle length
13 CQAS59 spikelet density
14 AQEP016 seedling vigor
15 AQAX004 carbohydrate content
16 CQQ26 root thickness
17 DQE50 relative water content
18 AQEE015 head rice
19 AQEE019 cracked grain percentage
20 CQAN11 days to heading
21 CQAN14 days to heading
22 CQB17 seed set percent
23 DQC16 penetrated to total root ratio
24 AQAP023 brown planthopper resistance
25 AQCU145 leaf width
26 AQDR018 grain yield per panicle
27 AQDQ047 grain yield per plant
28 AQDQ048 grain yield per plant
29 AQDQ049 seed weight
30 AQDQ050 seed weight
31 AQCC003 stigma exsertion
32 AQE042 grain yield per panicle
33 AQAB022 large vascular bundle number
34 AQAG018 tiller number
35 CQAB45 plant height
36 CQAB46 plant height
37 CQAB47 plant height
38 CQAB48 plant height
39 CQAB49 plant height
40 CQV10 plant height

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Yaish Mahmoud W; El-Kereamy Ashraf; Zhu Tong; Beatty Perrin H; Good Allen G; Bi Yong-Mei; Rothstein Steven J; The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6
PMID [20838584]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India