Rice gene details
Searching for LOC_Os06g51150 [catalase isozyme B, putative, expressed ]
with PubMed Id 22869603

  Search entire database for LOC_Os06g51150
Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os06g51150.1 493 18 401 PF00199.11 Catalase
2 LOC_Os06g51150.1 493 409 487 PF06628.4 Catalase-rel
3 LOC_Os06g51150.2 476 18 401 PF00199.11 Catalase
4 LOC_Os06g51150.2 476 409 474 PF06628.4 Catalase-rel
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  -1
N22InfloresenceFC
  -1
N22 Root FC
  1
IR64 Flag-leaf FC
  2
IR64InfloresenceFC
  1
IR64 Root FC
  -1

Functional details
Molecular Function
Not found
1 GO:0003824 catalytic activity (RGAP)
2 GO:0005515 protein binding (RGAP)
3 GO:0005488 binding (RGAP)
Biological process
Not found
1 GO:0009628 response to abiotic stimulus (RGAP)
2 GO:0008152 metabolic process (RGAP)
3 GO:0019725 cellular homeostasis (RGAP)
4 GO:0009991 response to extracellular stimulus (RGAP)
5 GO:0007154 cell communication (RGAP)
6 GO:0006950 response to stress (RGAP)
7 GO:0008219 cell death (RGAP)
8 GO:0009056 catabolic process (RGAP)
9 GO:0009987 cellular process (RGAP)
Cellular component
Not found
1 GO:0005777 peroxisome (RGAP)
2 GO:0005739 mitochondrion (RGAP)
3 GO:0009536 plastid (RGAP)
4 GO:0005840 ribosome (RGAP)
5 GO:0005829 cytosol (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007105 abscisic acid regimen (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 P1-PWY salvage pathways of purine and pyrimidine nucleotides
2 PWY0-163 salvage pathways of pyrimidine ribonucleotides

QTL details
S. No. QTL Id QTL Associated Trait
1 AQFP014 culm length
2 CQE47 chlorophyll content

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000006 plant protoplast (+)
2 PO:0009047 stem (+)
3 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Shi Ben; Ni Lan; Zhang Aying; Cao Jianmei; Zhang Hong; Qin Tingting; Tan Mingpu; Zhang Jianhua; Jiang Mingyi; OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5
PMID [22869603]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India