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Searching for LOC_Os06g51150
[catalase isozyme B, putative, expressed ] |
with PubMed Id 22869603
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Search entire database for LOC_Os06g51150 |
Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os06g51150.1 |
493 |
18 |
401 |
PF00199.11 |
Catalase |
2 |
LOC_Os06g51150.1 |
493 |
409 |
487 |
PF06628.4 |
Catalase-rel |
3 |
LOC_Os06g51150.2 |
476 |
18 |
401 |
PF00199.11 |
Catalase |
4 |
LOC_Os06g51150.2 |
476 |
409 |
474 |
PF06628.4 |
Catalase-rel |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007105 |
abscisic acid regimen |
(+) |
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Metabolic Pathway details
S. No. |
Pathway Id |
Pathway Description |
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1 |
P1-PWY |
salvage pathways of purine and pyrimidine nucleotides |
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2 |
PWY0-163 |
salvage pathways of pyrimidine ribonucleotides |
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QTL details
S. No. |
QTL Id |
QTL Associated Trait |
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1 |
AQFP014 |
culm length |
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2 |
CQE47 |
chlorophyll content |
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0000006 |
plant protoplast |
(+) |
2 |
PO:0009047 |
stem |
(+) |
3 |
PO:0025034 |
leaf |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Shi Ben; Ni Lan; Zhang Aying; Cao Jianmei; Zhang Hong; Qin Tingting; Tan Mingpu; Zhang Jianhua; Jiang Mingyi; OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5
PMID [22869603]
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