Rice gene details
Searching for LOC_Os11g33120 [respiratory burst oxidase, putative, expressed ]
with PubMed Id 22869603
  Search entire database for LOC_Os11g33120
Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os11g33120.1 937 164 261 PF08414.2 NADPH_Ox
2 LOC_Os11g33120.1 937 262 290 PF00036.24 efhand
3 LOC_Os11g33120.1 937 422 580 PF01794.11 Ferric_reduct
4 LOC_Os11g33120.1 937 621 742 PF08022.4 FAD_binding_8
5 LOC_Os11g33120.1 937 748 919 PF08030.4 NAD_binding_6
6 LOC_Os11g33120.2 729 164 261 PF08414.2 NADPH_Ox
7 LOC_Os11g33120.2 729 262 290 PF00036.24 efhand
8 LOC_Os11g33120.2 729 422 580 PF01794.11 Ferric_reduct
9 LOC_Os11g33120.2 729 621 725 PF08022.4 FAD_binding_8
10 LOC_Os11g33120.3 627 112 270 PF01794.11 Ferric_reduct
11 LOC_Os11g33120.3 627 311 432 PF08022.4 FAD_binding_8
12 LOC_Os11g33120.3 627 438 609 PF08030.4 NAD_binding_6
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22
Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  1
N22InfloresenceFC
  -1
N22 Root FC
  -8
IR64 Flag-leaf FC
  1
IR64InfloresenceFC
  -1
IR64 Root FC
  1

Functional details
Molecular Function
Not found
1 GO:0003824 catalytic activity (RGAP)
Biological process
Not found
1 GO:0006950 response to stress (RGAP)
2 GO:0009607 response to biotic stimulus (RGAP)
3 GO:0008219 cell death (RGAP)
4 GO:0008152 metabolic process (RGAP)
5 GO:0009987 cellular process (RGAP)
6 GO:0009628 response to abiotic stimulus (RGAP)
Cellular component
Not found
1 GO:0005886 plasma membrane (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007105 abscisic acid regimen (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN61 spikelet weight
2 AQFP007 culm thickness
3 AQEB009 1000-seed weight
4 AQEB014 1000-seed weight
5 CQAE12 panicle number
6 CQAE18 grain number
7 CQAE22 1000-grain weight
8 CQAE25 grain yield per plant
9 AQCU050 spikelet fertility
10 AQCU051 spikelet fertility
11 AQCU081 leaf width
12 AQCU091 spikelet number
13 AQCU099 spikelet number
14 AQCU195 plant height
15 AQCU247 spikelet number
16 AQCU251 spikelet number
17 AQCU261 spikelet fertility
18 AQAP050 brown planthopper resistance
19 AQCU077 leaf width
20 AQCU193 plant height
21 AQAP030 brown planthopper resistance
22 AQAQ017 blast disease resistance
23 AQCU056 days to heading
24 CQE79 carbon content
25 CQE80 space
26 CQAD6 allelopathic effect
27 CQN24 glutamine synthetase content
28 AQF018 seed dormancy
29 AQF035 seed dormancy
30 AQF053 awn length
31 AQF074 anther length
32 AQS004 sheath blight disease resistance
33 AQAO001 blast disease resistance
34 AQEN009 blast disease resistance
35 AQEN016 blast disease resistance
36 AQEN019 blast disease resistance
37 AQEN049 blast disease resistance
38 AQEN057 blast disease resistance
39 AQHQ012 days to flower
40 AQHQ021 days to flower
41 CQAX10 plant height
42 CQAR42 spikelet number
43 CQAR43 spikelet density
44 AQO010 biomass yield
45 AQO047 root thickness
46 AQO091 root number
47 DQC11 penetrated root number
48 DQC18 penetrated to total root ratio
49 CQN48 panicle weight
50 AQGI018 root dry weight
51 AQGI209 total biomass yield
52 CQAS137 spikelet density
53 AQCW016 H2O2 content
54 AQR016 deep root dry weight
55 AQR024 deep root to shoot ratio
56 AQR031 deep root dry weight
57 AQR050 root thickness
58 CQAH50 seed dormancy

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000006 plant protoplast (+)
2 PO:0009047 stem (+)
3 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

1  Shi Ben; Ni Lan; Zhang Aying; Cao Jianmei; Zhang Hong; Qin Tingting; Tan Mingpu; Zhang Jianhua; Jiang Mingyi; OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5
PMID [22869603]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India