Rice gene details
Searching for AAB40291 [ OSBZ8 ]


Functional details
Molecular Function
S. No. GO Id GO Description
Biological process
S. No. GO Id GO Description
1 GO:0009409 response to cold  
2 GO:0009628 response to abiotic stimulus  
3 GO:0009651 response to salt stress  
4 GO:0009737 response to abscisic acid stimulus  
5 GO:0046898 response to cycloheximide  
Cellular component
S. No. GO Id GO Description

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007048 sodium chloride regimen (+)
2 EO:0007105 abscisic acid regimen (+)
3 EO:0007332 cold air temperature regimen (+)
4 MCE:1000038 cycloheximide (+)

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000213 5-6 days post-anthesis stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000005 cultured plant cell (+)
2 PO:0009010 seed (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
S. No. Primary rice gene loci

Interacting rice gene loci

Experiment type

Id

Domain name/N or C term

Amino acid involved in interaction

Id

Domain name/N or C term

Bases
involved in interaction
Reference point cis-elements [PLACE Id]
1 AAB40291 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
2 AAB40291 - --- LOC_Os05g28210 - -159 to -180 - S000299 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
3 AAB40291 - --- LOC_Os11g26790 - -166 to -188 - S000007 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
4 AAB40291 - --- - -173 to -159 TrSS Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
5 AAB40291 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
6 AAB40291 - --- AAB40291 - to - S000041 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
7 AAB40291 - --- AAB40291 - to - S000053 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
8 AAB40291 - --- LOC_Os05g28210 - 323 to 345 - # Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
9 AAB40291 - --- LOC_Os11g26790 - 166 to 188 - S000007 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
10 AAB40291 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
      TSS - Transcriptional start site
TrSS - Translational start site
TSS-Pu - Putative TSS by cDNA alignment
TSS-P - Predicted TSS
Related publications [Sorted by year]

Nakagawa H; Ohmiya K; Hattori T; A rice bZIP protein, designated OSBZ8, is rapidly induced by abscisic acid. The Plant journal 1996:9
PMID [8820608]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India