Rice gene details
Searching for AAT64973 [ salt-stress inducible bZIP protein ]


Functional details
Molecular Function
S. No. GO Id GO Description
Biological process
S. No. GO Id GO Description
1 GO:0009628 response to abiotic stimulus  
2 GO:0009651 response to salt stress  
Cellular component
S. No. GO Id GO Description

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007048 sodium chloride regimen (+)
2 EO:0007105 abscisic acid regimen (+)
3 MCE:1000038 cycloheximide (+)

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009005 root (+)
2 PO:0025060 lamina (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
S. No. Primary rice gene loci

Interacting rice gene loci

Experiment type

Id

Domain name/N or C term

Amino acid involved in interaction

Id

Domain name/N or C term

Bases
involved in interaction
Reference point cis-elements [PLACE Id]
1 AAT64973 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
2 AAT64973 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
3 AAT64973 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
4 AAT64973 - --- - - - - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
5 AAT64973 - --- LOC_Os11g26790 - 1 to 294 - Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
6 AAT64973 - --- LOC_Os11g26790 - 1 to 294 - Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
7 AAT64973 - --- LOC_Os11g26790 - 1 to 294 - S000015 Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
8 AAT64973 - --- LOC_Os11g26790 - 1 to 294 - Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA)
      TSS - Transcriptional start site
TrSS - Translational start site
TSS-Pu - Putative TSS by cDNA alignment
TSS-P - Predicted TSS
Related publications [Sorted by year]

Mukherjee Kakali; Choudhury Aryadeep Roy; Gupta Bhaskar; Gupta Sudhiranjan; Sengupta Dibyendu N; An ABRE-binding factor, OSBZ8, is highly expressed in salt tolerant cultivars than in salt sensitive cultivars of indica rice. BMC plant biology 2006:6
PMID [16939657]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India