Rice gene details
Searching for BAC19839 [ calcium dependent protein kinase 13 ]


Functional details
Molecular Function
S. No. GO Id GO Description
Biological process
S. No. GO Id GO Description
1 GO:0006950 response to stress  
2 GO:0009409 response to cold  
Cellular component
S. No. GO Id GO Description

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007332 cold air temperature regimen (+)
2 MCE:1000287 recovery treatment from cold stress (+)

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (+)
2 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0008037 seedling (+)
2 PO:0009010 seed (+)
3 PO:0020104 leaf sheath (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 MCT:1000012 survival rate (+)
2 TO:0000430 germination rate (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Gao Shumei; Zhang Haiwen; Tian Yun; Li Fang; Zhang Zhijin; Lu Xiangyang; Chen Xiaoliang; Huang Rongfeng; Expression of TERF1 in rice regulates expression of stress-responsive genes and enhances tolerance to drought and high-salinity. Plant cell reports 2008:27
PMID [18777179]


Komatsu Setsuko; Yang Guangxiao; Khan Monowar; Onodera Haruko; Toki Seiichi; Yamaguchi Masayuki; Over-expression of calcium-dependent protein kinase 13 and calreticulin interacting protein 1 confers cold tolerance on rice plants. Molecular Genetics and Genomics 2007:277
PMID [17318583]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India