Rice gene details
Searching for BAE91893 [ iron(III)-deoxymugineic acid transporter ]


Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0005215 transporter activity  
2 GO:0015091 ferric iron transmembrane transporter activity  
3 GO:0015603 iron chelate transmembrane transporter activity  
4 GO:0051980 iron-nicotianamine transmembrane transporter activity  
Biological process
S. No. GO Id GO Description
1 GO:0000040 low-affinity iron ion transport  
2 GO:0006826 iron ion transport  
3 GO:0006827 high-affinity iron ion transport  
4 GO:0006879 cellular iron ion homeostasis  
5 GO:0006950 response to stress  
6 GO:0009416 response to light stimulus  
7 GO:0009628 response to abiotic stimulus  
8 GO:0010039 response to iron ion  
9 GO:0010106 cellular response to iron ion starvation  
10 GO:0015682 ferric iron transport  
11 GO:0015688 iron chelate transport  
12 GO:0042592 homeostatic process  
13 GO:0048589 developmental growth  
Cellular component
S. No. GO Id GO Description
1 GO:0005886 plasma membrane  

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007196 light regimen (+)
2 EO:0007242 iron nutrient regimen (+)
3 EO:0007309 zinc nutrient regimen (+)
4 MCE:1000143 iron deficiency treatment (+)
5 MCE:1000162 copper deficiency treatment (-)
6 MCE:1000163 zinc deficiency treatment (+)
7 MCE:1000164 manganese deficiency treatment (-)
8 MCE:1000182 iron fertilizer regimen (+)
9 MCE:1000203 dark regimen (+)
10 MCE:1000220 sodium nitroprusside regimen (+)
11 MCE:1000221 2-(4-carboxy-phenyl)-4,4,5,5- tetramethyllimidazoline-1-oxyl-3-oxide (CPTIO) (+)

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
2 PO:0007050 FR.03 late stage of fruit ripening (+)
3 PO:0007617 5 post anthesis (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000315 second leaf from base (+)
2 PO:0000003 whole plant (+)
3 PO:0000006 plant protoplast (+)
4 PO:0000258 root cortex (-)
5 PO:0005645 leaf mesophyll (+)
6 PO:0005772 exodermis (+)
7 PO:0006036 root epidermis (+)
8 PO:0008037 seedling (+)
9 PO:0009005 root (+)
10 PO:0009006 shoot system (+)
11 PO:0009010 seed (+)
12 PO:0020103 flag leaf (+)
13 PO:0020124 root stele (+)
14 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 TO:0000019 seedling height (+)
2 TO:0000207 plant height (+)
3 TO:0000344 days to flower (+)
4 TO:0000442 plant fresh weight (+)
5 TO:0000495 chlorophyll content (+)
6 TO:0006049 iron concentration (+)
7 TO:0006053 zinc concentration (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Pereira Margarida P; Santos Carla; Gomes Ana; Vasconcelos Marta W; Cultivar variability of iron uptake mechanisms in rice (Oryza sativa L.). Plant physiology and biochemistry : PPB / Societe francaise de physiologie vegetale 2014:85C
PMID [25394797]


Zheng Luqing; Ying Yinghui; Wang Lu; Wang Fang; Whelan James; Shou Huixia; Identification of a novel iron regulated basic helix-loop-helix protein involved in Fe homeostasis in Oryza sativa. BMC Plant Biology 2010:10
PMID [20699001]


Inoue Haruhiko; Kobayashi Takanori; Nozoye Tomoko; Takahashi Michiko; Kakei Yusuke; Suzuki Kazumasa; Nakazono Mikio; Nakanishi Hiromi; Mori Satoshi; Nishizawa Naoko K; Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid transporter expressed in the roots and is essential for iron uptake in early growth of the seedlings. The Journal of Biological Chemistry 2009:284
PMID [19049971]


Lee Sichul; Chiecko Jeff C; Kim Sun A; Walker Elsbeth L; Lee Youngsook; Guerinot Mary Lou; An Gynheung; Disruption of OsYSL15 leads to iron inefficiency in rice plants. Plant Physiology 2009:150
PMID [19376836]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India