Rice gene details
Searching for LOC_Os01g02120 [osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os01g02120.1 175 19 166 PF01161.12 PBP
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  1
N22InfloresenceFC
  1
N22 Root FC
  -2
IR64 Flag-leaf FC
  1
IR64InfloresenceFC
  1
IR64 Root FC
  -1

Functional details
Molecular Function
Not found
1 GO:0008289 lipid binding (RGAP)
Biological process
Not found
1 GO:0009791 post-embryonic development (RGAP)
2 GO:0009719 response to endogenous stimulus (RGAP)
Cellular component
Not found
1 GO:0005634 nucleus (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007105 abscisic acid regimen (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQAL7 chalkiness of endosperm
2 CQAL3 grain width
3 CQAL26 grain width
4 AQGI217 total biomass yield
5 AQGI197 total biomass yield
6 AQGI161 biomass yield
7 AQGI132 biomass yield
8 AQGI036 root dry weight
9 AQCQ036 1000-seed weight
10 AQCQ021 grain yield per plant
11 AQCQ014 1000-seed weight
12 AQCQ009 grain number
13 AQCQ001 grain yield per plant
14 AQAI052 large vascular bundle number to leaf area ratio
15 AQAF003 blast disease resistance
16 AQAF002 blast disease resistance
17 AQAF001 blast disease resistance

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000058 etiolated seedling (+)
2 PO:0009005 root (+)
3 PO:0009006 shoot system (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Ma Biao; Yin Cui-Cui; He Si-Jie; Lu Xiang; Zhang Wan-Ke; Lu Tie-Gang; Chen Shou-Yi; Zhang Jin-Song; Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10
PMID [25330236]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India