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Searching for LOC_Os01g24710
[jacalin-like lectin domain containing protein, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g24710.1 |
146 |
14 |
145 |
PF01419.9 |
Jacalin |
2 |
LOC_Os01g24710.2 |
146 |
14 |
145 |
PF01419.9 |
Jacalin |
3 |
LOC_Os01g24710.3 |
146 |
14 |
145 |
PF01419.9 |
Jacalin |
4 |
LOC_Os01g24710.4 |
138 |
14 |
137 |
PF01419.9 |
Jacalin |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0003674 |
molecular_function |
(RGAP) |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005575 |
cellular_component |
(RGAP) |
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0007115 |
LP.04 four leaves visible |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0008037 |
seedling |
(+) |
2 |
PO:0020039 |
leaf lamina |
(+) |
3 |
PO:0025034 |
leaf |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Fukao Takeshi; Yeung Elaine; Bailey-Serres Julia; The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice. The Plant Cell 2011:23
PMID [21239643]
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2 |
Amir Hossain Md; Lee Yongjoo; Cho Jung-Il; Ahn Chul-Hyun; Lee Sang-Kyu; Jeon Jong-Seong; Kang Hun; Lee Choon-Hwan; An Gynheung; Park Phun Bum; The bZIP transcription factor OsABF1 is an ABA responsive element binding factor that enhances abiotic stress signaling in rice. Plant Molecular Biology 2010:72
PMID [20039193]
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3 |
Piao Hai-long; Xuan Yuan-hu; Park Su Hyun; Je Byoung Il; Park Soon Ju; Park Sung Han; Kim Chul Min; Huang Jin; Wang Guo Kui; Kim Min Jung; Kang Sang Mo; Lee In-Jung; Kwon Taek-Ryoun; Kim Yong Hwan; Yeo Un-sang; Yi Gihwan; Son DaeYoung; Han Chang-deok; OsCIPK31, a CBL-interacting protein kinase is involved in germination and seedling growth under abiotic stress conditions in rice plants. Molecules and Cells 2010:30
PMID [20652492]
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4 |
Jiang Chang-Jie; Shimono Masaki; Sugano Shoji; Kojima Mikiko; Yazawa Katsumi; Yoshida Riichiro; Inoue Haruhiko; Hayashi Nagao; Sakakibara Hitoshi; Takatsuji Hiroshi; Abscisic acid interacts antagonistically with salicylic acid signaling pathway in rice-Magnaporthe grisea interaction. Molecular plant-microbe interactions : MPMI 2010:23
PMID [20459318]
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5 |
Dai Xiaoyan; Xu Yunyuan; Ma Qibin; Xu Wenying; Wang Tai; Xue Yongbiao; Chong Kang; Overexpression of an R1R2R3 MYB gene, OsMYB3R-2, increases tolerance to freezing, drought, and salt stress in transgenic Arabidopsis. Plant Physiology 2007:143
PMID [17293435]
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