Rice gene details
Searching for LOC_Os01g26210 [OsWAK6 - OsWAK receptor-like protein kinase, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os01g26210.1 525 119 148 PF07645.7 EGF_CA
2 LOC_Os01g26210.1 525 235 438 PF00069.17 Pkinase
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  2
N22InfloresenceFC
  1
N22 Root FC
  1
IR64 Flag-leaf FC
  -1
IR64InfloresenceFC
 
IR64 Root FC
  1

Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0016301 kinase activity (RGAP)
2 GO:0005515 protein binding (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0009409 response to cold  
2 GO:0006464 protein modification process (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005886 plasma membrane (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007174 cold temperature regimen (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQH2 penetrated root thickness
2 AQEN001 blast disease resistance
3 CQAX2 plant height
4 AQEN018 blast disease resistance
5 AQEN011 blast disease resistance
6 AQAI036 leaf area to spikelet number ratio
7 AQAI027 leaf area to spikelet number ratio
8 AQAI006 leaf area
9 AQFU004 head rice
10 AQED048 grain yield per plant
11 AQCU255 spikelet fertility
12 AQCU252 spikelet number
13 AQCU240 spikelet number
14 AQCU182 days to heading
15 AQCU120 days to heading
16 AQCU114 days to heading
17 AQCU070 leaf length
18 AQCU052 days to heading
19 AQEP015 seedling vigor
20 CQX6 culm length
21 CQS5 seminal root length
22 AQGG005 callus induction
23 AQGG006 callus induction
24 AQHE119 plant height
25 AQEY003 1000-seed weight
26 AQGI037 root dry weight
27 AQA044 root to shoot ratio
28 AQAL060 root thickness
29 AQAL048 deep root dry weight
30 CQX21 internode length
31 CQN51 spikelet number
32 CQN5 soluble protein content
33 CQN43 panicle weight
34 CQN26 leaf senescence
35 AQCV031 chalkiness of endosperm
36 CQAO10 1000-seed weight
37 AQCT001 blast disease resistance
38 CQI1 potassium concentration
39 AQAX011 carbohydrate content
40 AQAX003 carbohydrate content
41 AQAW039 filled grain percentage
42 AQAW036 secondary branch
43 AQAW032 filled grain percentage
44 AQAW030 spikelet number
45 AQAW029 spikelet number
46 AQAW024 spikelet number
47 AQAW023 spikelet number
48 CQN49 spikelet number
49 CQN3 soluble protein content
50 CQE3 plant height
51 CQE2 plant height
52 CQE6 specific leaf area
53 CQF2 soluble protein content
54 AQCW010 H2O2 content
55 AQCW002 chlorophyll content
56 CQN53 spikelet number
57 CQN45 panicle weight
58 CQN28 leaf senescence

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009006 shoot system (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

de Oliveira Luiz Felipe Valter; Christoff Ana Paula; de Lima Júlio Cesar; de Ross Bruno Comparsi Feijó; Sachetto-Martins Gilberto; Margis-Pinheiro Marcia; Margis Rogerio; The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229
PMID [25443845]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India