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Searching for LOC_Os01g37560
[chaperone protein dnaJ 49, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g37560.1 |
381 |
130 |
191 |
PF00226.23 |
DnaJ |
2 |
LOC_Os01g37560.1 |
381 |
283 |
375 |
PF09320.3 |
DUF1977 |
3 |
LOC_Os01g37560.2 |
381 |
130 |
191 |
PF00226.23 |
DnaJ |
4 |
LOC_Os01g37560.2 |
381 |
283 |
375 |
PF09320.3 |
DUF1977 |
5 |
LOC_Os01g37560.3 |
381 |
130 |
191 |
PF00226.23 |
DnaJ |
6 |
LOC_Os01g37560.3 |
381 |
283 |
375 |
PF09320.3 |
DUF1977 |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0005515 |
protein binding |
(RGAP) |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005886 |
plasma membrane |
(RGAP) |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007173 |
warm/hot temperature regimen |
(+) |
2 |
EO:0007175 |
temperature environment |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
Plant tissue/organ
Others
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCT:2000012 |
yeast growth |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Sarkar Neelam K; Thapar Upasna; Kundnani Preeti; Panwar Priyankar; Grover Anil; Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18
PMID [23160806]
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